RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 C5orf34Q96MH7 638 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 WDR13Q9H1Z4 485 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 LDAHQ9H6V9 325 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 CHST11Q9NPF2 352 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 PRELID1Q9Y255 219 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 NPIPB13A6NJU9 1138 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 NPIPB4C9JG80 1138 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 TTRP02766 147 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 MPZP25189 248 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 EIF1AXP47813 144 aaKnown RBP13.68□□□□□ -0.22
BRCC3-201ENST00000330045 CXCL12P48061 93 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 STARP49675 285 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 FBXW4P57775 412 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 FOXL2P58012 376 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 PPP1R1AQ13522 171 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 FAM74A1Q5RGS3 127 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 OR52W1Q6IF63 320 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 KLHL24Q6TFL4 600 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 SLC22A24Q8N4F4 322 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 ZDHHC22Q8N966 263 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 CADM4Q8NFZ8 388 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 OR1M1Q8NGA1 313 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 OR10H5Q8NGA6 315 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 PMEPA1Q969W9 287 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 MRGPRFQ96AM1 343 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 SLAMF6Q96DU3 332 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 ADAT3Q96EY9 351 aaPredicted RBP13.68□□□□□ -0.22
BRCC3-201ENST00000330045 VRK1Q99986 396 aaPredicted RBP13.68□□□□□ -0.22
BRCC3-201ENST00000330045 CST11Q9H112 138 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 FSCN3Q9NQT6 498 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 VDAC3Q9Y277 283 aa13.68□□□□□ -0.22
BRCC3-201ENST00000330045 SYT7O43581 403 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 HLA-GP17693 338 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 LUMP51884 338 aaPredicted RBP13.67□□□□□ -0.22
BRCC3-201ENST00000330045 NXPH1P58417 271 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 IL13RA1P78552 427 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 ZMYND11Q15326 602 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 NUDCD2Q8WVJ2 157 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 C11orf40Q8WZ69 217 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 DDIT4LQ96D03 193 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 PTGES2Q9H7Z7 377 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 PLEKHA6Q9Y2H5 1048 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 C9orf170A2RU37 121 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 BCL2L11O43521 198 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 DUX1O43812 170 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 STK17BO94768 372 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 BPNT1O95861 308 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 VSIG8P0DPA2 414 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 CD96P40200 585 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 ATP1B3P54709 279 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 QRFPP83859 136 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 ZNF273Q14593 569 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 SLC22A6Q4U2R8 563 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 THAP3Q8WTV1 239 aaPredicted RBP13.67□□□□□ -0.22
BRCC3-201ENST00000330045 MITD1Q8WV92 249 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 PHB2Q99623 299 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 UQCC2Q9BRT2 126 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 EMC6Q9BV81 110 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 PBOV1Q9GZY1 135 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 DNTTIP1Q9H147 329 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 DUSP15Q9H1R2 295 aaPredicted RBP13.67□□□□□ -0.22
BRCC3-201ENST00000330045 IFT46Q9NQC8 304 aa13.67□□□□□ -0.22
BRCC3-201ENST00000330045 ZNF354AO60765 605 aaPredicted RBP13.66□□□□□ -0.22
BRCC3-201ENST00000330045 IL2RAP01589 272 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 HRH1P35367 487 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 BIDP55957 195 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 BEX5Q5H9J7 111 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 ACOT7LQ6ZUV0 252 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 OR5D14Q8NGL3 314 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 ZNF471Q9BX82 626 aaPredicted RBP13.66□□□□□ -0.22
BRCC3-201ENST00000330045 RNF222A6NCQ9 220 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 FAM25EA8MYX2 175 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 H3BML4 177 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 ZNF208O43345 1280 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 APOC3P02656 99 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 GNB3P16520 340 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 DLSTP36957 453 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 ATXN7L3Q14CW9 347 aaPredicted RBP13.66□□□□□ -0.22
BRCC3-201ENST00000330045 MOB3CQ70IA8 216 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 NECAB3Q96P71 396 aaPredicted RBP13.66□□□□□ -0.22
BRCC3-201ENST00000330045 ZC4H2Q9NQZ6 224 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 FGF21Q9NSA1 209 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 CYB5R1Q9UHQ9 305 aa13.66□□□□□ -0.22
BRCC3-201ENST00000330045 VSTM2BA6NLU5 285 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 SCGNO76038 276 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 ERCC1P07992 297 aaPredicted RBP13.65□□□□□ -0.22
BRCC3-201ENST00000330045 CTRB1P17538 263 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 RAB3AP20336 220 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 AVPR2P30518 371 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 SUMO3P55854 103 aaPredicted RBP13.65□□□□□ -0.22
BRCC3-201ENST00000330045 CLDN6P56747 220 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 GPR85P60893 370 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 FOXF1Q12946 379 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 CTRB2Q6GPI1 263 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 FAHD2BQ6P2I3 314 aaPredicted RBP13.65□□□□□ -0.22
BRCC3-201ENST00000330045 RHOUQ7L0Q8 258 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 APCDD1LQ8NCL9 501 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 OR13C9Q8NGT0 318 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 ZNF501Q96CX3 271 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms