RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZNF574Q6ZN55 896 aaPredicted RBP11.42□□□□□ -0.58
CCDC60-201ENST00000327554 ATG4DQ86TL0 474 aaPredicted RBP11.42□□□□□ -0.58
CCDC60-201ENST00000327554 PNLDC1Q8NA58 520 aaKnown RBP11.42□□□□□ -0.58
CCDC60-201ENST00000327554 DTWD2Q8NBA8 298 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 OR4C3Q8NH37 302 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 C2orf50Q96LR7 162 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 ASB16Q96NS5 453 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 HDAC8Q9BY41 377 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 AMDHD2Q9Y303 409 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 LMX1BO60663 402 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 CXCL10P02778 98 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 GNB3P16520 340 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 THBS4P35443 961 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 RIDAP52758 137 aaKnown RBP11.42□□□□□ -0.58
CCDC60-201ENST00000327554 ROM1Q03395 351 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 SPEM2Q0P670 501 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 KIAA0141Q14154 515 aaPredicted RBP11.42□□□□□ -0.58
CCDC60-201ENST00000327554 GUK1Q16774 197 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 OR2A2Q6IF42 318 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 SSX9Q7RTT3 188 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 TAF8Q7Z7C8 310 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 OR1J1Q8NGS3 322 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 TERB2Q8NHR7 220 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 FLVCR1-AS1Q8TAF5 88 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 LCN9Q8WX39 176 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 FAM46BQ96A09 425 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 C8orf44Q96CB5 159 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 LRRC3BQ96PB8 259 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 UCK1Q9HA47 277 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 HDGFL3Q9Y3E1 203 aa11.42□□□□□ -0.58
CCDC60-201ENST00000327554 LAMA2P24043 3122 aaKnown RBP11.41□□□□□ -0.58
CCDC60-201ENST00000327554 CEACAM18A8MTB9 384 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 OR10H2O60403 315 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 TSPAN15O95858 294 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 CEACAM5P06731 702 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 DNASE1L1P49184 302 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 QRFPP83859 136 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 MIDNQ504T8 468 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 MAMDC2Q7Z304 686 aaPredicted RBP11.41□□□□□ -0.58
CCDC60-201ENST00000327554 ZNF565Q8N9K5 539 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 OR2I1PQ8NGU4 316 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 OR4K15Q8NH41 348 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 SLC25A43Q8WUT9 341 aaPredicted RBP11.41□□□□□ -0.58
CCDC60-201ENST00000327554 RAB7BQ96AH8 199 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 VSTM2LQ96N03 204 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 PARP12Q9H0J9 701 aaKnown RBP11.41□□□□□ -0.58
CCDC60-201ENST00000327554 ZDHHC4Q9NPG8 344 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 MRPL22Q9NWU5 206 aaKnown RBP11.41□□□□□ -0.58
CCDC60-201ENST00000327554 URADA6NGE7 173 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 UMAD1C9J7I0 102 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 HRKO00198 91 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 ZNF217O75362 1048 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 GAPDHP04406 335 aaKnown RBP11.41□□□□□ -0.58
CCDC60-201ENST00000327554 ADH1AP07327 375 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 CD63P08962 238 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 PET100P0DJ07 73 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 ZNF10P21506 573 aaPredicted RBP11.41□□□□□ -0.58
CCDC60-201ENST00000327554 RBP2P50120 134 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 NPY4RP50391 375 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 S100A10P60903 97 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 RPS23P62266 143 aaKnown RBP11.41□□□□□ -0.58
CCDC60-201ENST00000327554 ZNHIT3Q15649 155 aaPredicted RBP11.41□□□□□ -0.58
CCDC60-201ENST00000327554 CACUL1Q86Y37 369 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 OR13C3Q8NGS6 347 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 SPACA7Q96KW9 195 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 ZBP1Q9H171 429 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 CNTD2Q9H8S5 307 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 PARPBPQ9NWS1 579 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 FBXL17Q9UF56 701 aa11.41□□□□□ -0.58
CCDC60-201ENST00000327554 ARGFXA6NJG6 315 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 BCAT2O15382 392 aaPredicted RBP11.4□□□□□ -0.58
CCDC60-201ENST00000327554 SLC31A2O15432 143 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 SRSF10O75494 262 aaKnown RBP11.4□□□□□ -0.58
CCDC60-201ENST00000327554 HLA-DQA2P01906 255 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 SPARCP09486 303 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 CSF2RAP15509 400 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 HIST1H1BP16401 226 aaKnown RBP11.4□□□□□ -0.58
CCDC60-201ENST00000327554 ZNF708P17019 499 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 PI3P19957 117 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 SQSTM1Q13501 440 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 NNATQ16517 81 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 PTCRAQ6ISU1 281 aaPredicted RBP11.4□□□□□ -0.58
CCDC60-201ENST00000327554 SLC18B1Q6NT16 456 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 COMMD1Q8N668 190 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 OR9K2Q8NGE7 335 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 KTI12Q96EK9 354 aaPredicted RBP11.4□□□□□ -0.58
CCDC60-201ENST00000327554 GAS2L1Q99501 681 aaPredicted RBP11.4□□□□□ -0.58
CCDC60-201ENST00000327554 METTL8Q9H825 291 aaKnown RBP11.4□□□□□ -0.58
CCDC60-201ENST00000327554 CUTCQ9NTM9 273 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 RNF186Q9NXI6 227 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 GAR1Q9NY12 217 aaKnown RBP11.4□□□□□ -0.58
CCDC60-201ENST00000327554 HHLA2Q9UM44 414 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 LRP12Q9Y561 859 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 SPACA6W5XKT8 324 aa11.4□□□□□ -0.58
CCDC60-201ENST00000327554 FREM3P0C091 2139 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 EML2O95834 649 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 PNMTP11086 282 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 NDUFB7P17568 137 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 S100A2P29034 98 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 DRD3P35462 400 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms