RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 DEFA1P59665 94 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 DEFA3P59666 94 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 IGFBP7Q16270 282 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 NABP1Q96AH0 204 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 SFXN3Q9BWM7 321 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 OPN3Q9H1Y3 402 aaPredicted RBP16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 NELFAQ9H3P2 528 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 SP140LQ9H930 580 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 G6PC2Q9NQR9 355 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 PLSCR4Q9NRQ2 329 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 FAIMQ9NVQ4 179 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 OR52A1Q9UKL2 312 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 FBXL3Q9UKT7 428 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 PROCRQ9UNN8 238 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 SLC22A13Q9Y226 551 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 AK6Q9Y3D8 172 aaKnown RBP16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 TMEM269A0A1B0GVZ9 245 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 ZNF878C9JN71 531 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 ATF1P18846 271 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 MAGEB1P43366 347 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 SOX2P48431 317 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 PSMD7P51665 324 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 SGCAQ16586 387 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 KLHL24Q6TFL4 600 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 STAC2Q6ZMT1 411 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 ZNF704Q6ZNC4 412 aaPredicted RBP16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 SYT9Q86SS6 491 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 RDH10Q8IZV5 341 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 TRMT10AQ8TBZ6 339 aaKnown RBP16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 TMEM106AQ96A25 262 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 CMTM3Q96MX0 182 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 MRI1Q9BV20 369 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 PPP1R3EQ9H7J1 279 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 CYSLTR2Q9NS75 346 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 TBCCD1Q9NVR7 557 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 TMEM38BQ9NVV0 291 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 GTF2A1LQ9UNN4 478 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 SLC2A2P11168 524 aaPredicted RBP16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 B4GALT1P15291 398 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 ELK1P19419 428 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 NPR2P20594 1047 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 MSR1P21757 451 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 ARF1P84077 181 aaKnown RBP16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 CFAP77Q6ZQR2 320 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 OR8H2Q8N162 312 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 ZNF610Q8N9Z0 462 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 OR10S1Q8NGN2 331 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 OR10AC1Q8NH08 325 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 SETD6Q8TBK2 473 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 FOXB1Q99853 325 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 V9GY05 133 aa16.41■□□□□ 0.22
EXOSC3-201ENST00000327304 FAM25AB3EWG3 89 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 FAM25CB3EWG5 89 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 FAM25GB3EWG6 89 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 AIPO00170 330 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 CCL21O00585 134 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 C1QL1O75973 258 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 PTTG1O95997 202 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 ITGA5P08648 1049 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 ACHEP22303 614 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 MRPS34P82930 218 aaKnown RBP16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 TMEM244Q5VVB8 128 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 TMEM211Q6ICI0 200 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 ZNF843Q8N446 348 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 POC5Q8NA72 575 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 OR51A4Q8NGJ6 313 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 TSEN15Q8WW01 171 aaKnown RBP16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 GFI1Q99684 422 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 MOB1AQ9H8S9 216 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 FAM206AQ9NX38 181 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 ASH2LQ9UBL3 628 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 SPATA2Q9UM82 520 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 IFITM5A6NNB3 132 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 B8ZZF3 427 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 UBCP0CG48 685 aaKnown RBP16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 BMP5P22003 454 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 TALDO1P37837 337 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 UQCRFS1P47985 274 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 STK11Q15831 433 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 ODF4Q2M2E3 257 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 PYDC2Q56P42 97 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 Q6ZT83 130 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 LRRTM1Q86UE6 522 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 SAMD12Q8N8I0 201 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 GALNT11Q8NCW6 608 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 ORAI1Q96D31 301 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 C14orf119Q9NWQ9 140 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 HHLA2Q9UM44 414 aa16.4■□□□□ 0.22
EXOSC3-201ENST00000327304 hCG_2014768A0A024R1R8 64 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 MAGEB3O15480 346 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 IL18BPO95998 194 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 APOA1P02647 267 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 CD2P06729 351 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 IL7P13232 177 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 GNLYP22749 145 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 MPGP29372 298 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 OPRM1P35372 400 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 BAK1Q16611 211 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 BCL2L15Q5TBC7 163 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 ZNF813Q6ZN06 617 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms