RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 SFRP4Q6FHJ7 346 aaPredicted RBP6.78□□□□□ -1.32
CCNC-201ENST00000326298 ZNF841Q6ZN19 808 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 ZNF826PQ6ZT77 177 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 PIGWQ7Z7B1 504 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 ZDHHC21Q8IVQ6 265 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 C1orf174Q8IYL3 243 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 PGAM4Q8N0Y7 254 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 BPIFB2Q8N4F0 458 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 KLHL36Q8N4N3 616 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 ZNF511Q8NB15 262 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 OR4C15Q8NGM1 316 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 OR4Q3Q8NH05 313 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 ZFAND2BQ8WV99 257 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 APOBEC3DQ96AK3 386 aaPredicted RBP6.78□□□□□ -1.32
CCNC-201ENST00000326298 ZNF582Q96NG8 517 aaPredicted RBP6.78□□□□□ -1.32
CCNC-201ENST00000326298 WACQ9BTA9 647 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 HDHD2Q9H0R4 259 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 CTSZQ9UBR2 303 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 PCDHGB1Q9Y5G3 927 aa6.78□□□□□ -1.32
CCNC-201ENST00000326298 PPIAL4EA0A075B759 164 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 PPIAL4CA0A0B4J2A2 164 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 TCRBV5S2A0A599 114 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 C22orf46C9J442 243 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 PPIAL4DF5H284 164 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SOX14O95416 240 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 HLA-DQA2P01906 255 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 LCATP04180 440 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 FABP3P05413 133 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 PPIAL4FP0DN26 164 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 CRABP1P29762 137 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SLC6A6P31641 620 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 MDH2P40926 338 aaKnown RBP6.77□□□□□ -1.33
CCNC-201ENST00000326298 TRAP1Q12931 704 aaKnown RBP6.77□□□□□ -1.33
CCNC-201ENST00000326298 TSPAN31Q12999 210 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 KRT72Q14CN4 511 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 BRD3OSQ6XYD6 125 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SPATC1Q76KD6 591 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 KLBQ86Z14 1044 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 LNX2Q8N448 690 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SPICQ8N5J4 248 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 OR13G1Q8NGZ3 307 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 NSMCE2Q96MF7 247 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 ATF6BQ99941 703 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 RASSF4Q9H2L5 321 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SMURF1Q9HCE7 757 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 TMCC3Q9ULS5 477 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 U3KQV3 271 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 A0A1B0GW55 424 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 TRIM77I1YAP6 450 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 WIPF1O43516 503 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 FAM20BO75063 409 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SFTPBP07988 381 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 DUX4L2P0CJ85 424 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 DUX4L3P0CJ86 424 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 DUX4L4P0CJ87 422 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 DUX4L5P0CJ88 424 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 DUX4L6P0CJ89 424 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 DUX4L7P0CJ90 424 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 RPS2P15880 293 aaKnown RBP6.77□□□□□ -1.33
CCNC-201ENST00000326298 TNFSF4P23510 183 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 GATA3P23771 443 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 PRKXP51817 358 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 RAD23AP54725 363 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 PRB3Q04118 309 aaPredicted RBP6.77□□□□□ -1.33
CCNC-201ENST00000326298 SRSF4Q08170 494 aaKnown RBP6.77□□□□□ -1.33
CCNC-201ENST00000326298 CRMP1Q14194 572 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 ZNF404Q494X3 552 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 GLYATL3Q5SZD4 288 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SLC27A4Q6P1M0 643 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 DUX4L9Q6RFH8 374 aaPredicted RBP6.77□□□□□ -1.33
CCNC-201ENST00000326298 FITM2Q8N6M3 262 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 C3orf56Q8N813 242 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SLC37A3Q8NCC5 494 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SEH1LQ96EE3 360 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 AMELYQ99218 206 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 SSBP3Q9BWW4 388 aaPredicted RBP6.77□□□□□ -1.33
CCNC-201ENST00000326298 SUCNR1Q9BXA5 334 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 MED20Q9H944 212 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 TAS2R1Q9NYW7 299 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 ZNF319Q9P2F9 582 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 DUX4Q9UBX2 424 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 ATPIF1Q9UII2 106 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 MAGEL2Q9UJ55 1249 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 NUP50Q9UKX7 468 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 N6AMT1Q9Y5N5 214 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 COMMD3-BMI1R4GMX3 469 aa6.77□□□□□ -1.33
CCNC-201ENST00000326298 TRAV40A0A0B4J280 105 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 NDUFAB1O14561 156 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 KCNAB3O43448 404 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 RENP00797 406 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 TUBG1P23258 451 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 OMGP23515 440 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 OTX1P32242 354 aaPredicted RBP6.76□□□□□ -1.33
CCNC-201ENST00000326298 RGS6P49758 472 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 HMGA2P52926 109 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 SLC9A3R2Q15599 337 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 ESCO2Q56NI9 601 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 ARMCX4Q5H9R4 360 aa6.76□□□□□ -1.33
CCNC-201ENST00000326298 SAMD4BQ5PRF9 694 aaKnown RBP6.76□□□□□ -1.33
CCNC-201ENST00000326298 RUSC1-AS1Q66K80 236 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms