RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 IGKV3-11P04433 115 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 MGMTP16455 207 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 PNLIPRP2P54317 469 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 PRSS12P56730 875 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 RAP1BP61224 184 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 RAP1AP62834 184 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 RNF4P78317 190 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 DMWDQ09019 674 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 OR2W3Q7Z3T1 314 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 UEVLDQ8IX04 471 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 CCDC36Q8IYA8 594 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 ZSCAN1Q8NBB4 408 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 PBOV1Q9GZY1 135 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 RAB22AQ9UL26 194 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 MRPS28Q9Y2Q9 187 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 TRAV14DV4A0A0A6YYC5 116 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 ITGB2P05107 769 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 SNTB1Q13884 538 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 RAB30Q15771 203 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 SLC22A24Q8N4F4 322 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 OR13C8Q8NGS7 320 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 OR2I1PQ8NGU4 316 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 DDIT4LQ96D03 193 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 MLXQ9UH92 298 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 RALGAPA1Q6GYQ0 2036 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 EML5Q05BV3 1969 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 A0A1B0GX78 115 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 TUBAL3A6NHL2 446 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 LILRA5A6NI73 299 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 RPA2P15927 270 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 FOXK1P85037 733 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 LY6G6FQ5SQ64 297 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 LCN10Q6JVE6 187 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF585AQ6P3V2 769 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 NAXDQ8IW45 347 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 ARHGEF39Q8N4T4 335 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 BPIFCQ8NFQ6 507 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF519Q8TB69 540 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 ROBO4Q8WZ75 1007 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 RAB3CQ96E17 227 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 REG4Q9BYZ8 158 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 SCPEP1Q9HB40 452 aa11.5□□□□□ -0.57
HMGCS1-201ENST00000325110 F8W036 122 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 RER1O15258 196 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 ADAP1O75689 374 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 GLI4P10075 376 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 SERPINA2P20848 420 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 RPL35P42766 123 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 BLOC1S1P78537 153 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 HAGHLQ6PII5 290 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 LYG2Q86SG7 212 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 OR4K17Q8NGC6 315 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 OR1S2Q8NGQ3 325 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 OR10R2Q8NGX6 335 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 OR6K3Q8NGY3 331 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 RPS4Y2Q8TD47 263 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 ELP5Q8TE02 316 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 LIPHQ8WWY8 451 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 HRH4Q9H3N8 390 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 GPR84Q9NQS5 396 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 KLHL13Q9P2N7 655 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 PCDHB10Q9UN67 800 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 IGHV1OR15-9A0A0B4J2B8 117 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 H3BUI4 141 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 TSPAN2O60636 221 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 CD27P26842 260 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 CSNK2A1P68400 391 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 RSPO4Q2I0M5 234 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 TMEM176BQ3YBM2 270 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 FAM122CQ6P4D5 195 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 RNF144BQ7Z419 303 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 TMEM200AQ86VY9 491 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 CSNK2A3Q8NEV1 391 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 WDR77Q9BQA1 342 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 TMEM59Q9BXS4 323 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 CHST11Q9NPF2 352 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 SERINC1Q9NRX5 453 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 RHBDD3Q9Y3P4 386 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 FAM74A7A6NL05 159 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 DXOO77932 396 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF43P17038 809 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 EFNA3P52797 238 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 C17orf67Q0P5P2 114 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 CCDC157Q569K6 752 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 LRRC18Q8N456 261 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 OR51T1Q8NGJ9 327 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 OR5H2Q8NGV7 314 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 PGAM5Q96HS1 289 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 CYYR1Q96J86 154 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 SMIM3Q9BZL3 60 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 SLCO5A1Q9H2Y9 848 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 GAREM1Q9H706 876 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 SLC22A11Q9NSA0 550 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 AUP1Q9Y679 476 aa11.49□□□□□ -0.57
HMGCS1-201ENST00000325110 C9orf170A2RU37 121 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 GPR31O00270 319 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 TMEM127O75204 238 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 IFI6P09912 130 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms