RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 OR2I1PQ8NGU4 316 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 ST8SIA4Q92187 359 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 CST11Q9H112 138 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 ALKBH4Q9NXW9 302 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 PFDN2Q9UHV9 154 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 H3BUI4 141 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 TSPAN4O14817 238 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 CLDN6P56747 220 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 DCDP81605 110 aaKnown RBP15.47■□□□□ 0.07
COL9A1-201ENST00000320755 PCK2Q16822 640 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF260Q3ZCT1 412 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 PTCRAQ6ISU1 281 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-201ENST00000320755 TMEM81Q6P7N7 255 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 CARFQ8N187 725 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 TMEM41AQ96HV5 264 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 WDR77Q9BQA1 342 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-201ENST00000320755 REG4Q9BYZ8 158 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 MS4A7Q9GZW8 240 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-201ENST00000320755 KCNMB2Q9Y691 235 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 OR6C65A6NJZ3 312 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 NAGAP17050 411 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 RAB3AP20336 220 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF93P35789 620 aaPredicted RBP15.46■□□□□ 0.07
COL9A1-201ENST00000320755 CD96P40200 585 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 PPP1R1AQ13522 171 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 COL19A1Q14993 1142 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 MYO7BQ6PIF6 2116 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 KMT5CQ86Y97 462 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 SLC22A24Q8N4F4 322 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 POC1BQ8TC44 478 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 NPRL2Q8WTW4 380 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 ALX4Q9H161 411 aaPredicted RBP15.46■□□□□ 0.07
COL9A1-201ENST00000320755 SLCO5A1Q9H2Y9 848 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 MYOTQ9UBF9 498 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 RARRES3Q9UL19 164 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 LHFPL6Q9Y693 200 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 A0A1W2PP11 408 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 RFPL4AA6NLU0 287 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 RFPL4AL1F8VTS6 287 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 MPIG6BO95866 241 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 CCL7P80098 99 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 BTN1A1Q13410 526 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 ZMYND11Q15326 602 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 TOMM20Q15388 145 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 PLPPR5Q32ZL2 321 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 DEGS2Q6QHC5 323 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 TGIF2Q9GZN2 237 aa15.46■□□□□ 0.07
COL9A1-201ENST00000320755 EEF1E1-BLOC1S5C9J1V9 151 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 NUPL2O15504 423 aaKnown RBP15.45■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF208O43345 1280 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 IFNA6P05013 189 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 NUP62P37198 522 aaPredicted RBP15.45■□□□□ 0.06
COL9A1-201ENST00000320755 CAPZA1P52907 286 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 CPEB2Q7Z5Q1 589 aaKnown RBP15.45■□□□□ 0.06
COL9A1-201ENST00000320755 BOLLQ8N9W6 283 aaKnown RBP15.45■□□□□ 0.06
COL9A1-201ENST00000320755 TMEM104Q8NE00 496 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 OR5D18Q8NGL1 313 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 NUBPLQ8TB37 319 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 AQP3Q92482 292 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 FOXRED1Q96CU9 486 aaPredicted RBP15.45■□□□□ 0.06
COL9A1-201ENST00000320755 WBP1Q96G27 269 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 COMMD9Q9P000 198 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 SEMA5BQ9P283 1151 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF319Q9P2F9 582 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 KCNK7Q9Y2U2 307 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 EML6Q6ZMW3 1958 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 A0A1W2PQM1 296 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 MFSD2BA6NFX1 497 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 SIGLEC5O15389 551 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 B3GALNT1O75752 331 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 STK17BO94768 372 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 M6PRP20645 277 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 DHPSP49366 369 aaPredicted RBP15.45■□□□□ 0.06
COL9A1-201ENST00000320755 IL13RA1P78552 427 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 ACY1Q03154 408 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 SIGLEC14Q08ET2 396 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 SHBQ15464 509 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 MPPED2Q15777 294 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 RABEPKQ7Z6M1 372 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 ADAD2Q8NCV1 583 aaKnown RBP15.45■□□□□ 0.06
COL9A1-201ENST00000320755 OR5L2Q8NGL0 311 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 GPER1Q99527 375 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 DEFB126Q9BYW3 111 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 GPR84Q9NQS5 396 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 KLHL13Q9P2N7 655 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 SESN1Q9Y6P5 492 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 NCOA6Q14686 2063 aaPredicted RBP15.45■□□□□ 0.06
COL9A1-201ENST00000320755 LOC390937A0A1W2PQ73 354 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 OR14I1A6ND48 311 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 G3V3Y1 287 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 ZFAND5O76080 213 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 IGHG1P01857 330 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 CELA2AP08217 269 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 ZNF121P58317 390 aaPredicted RBP15.45■□□□□ 0.06
COL9A1-201ENST00000320755 RAB12Q6IQ22 244 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 GLIPR1L1Q6UWM5 242 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 WIF1Q9Y5W5 379 aa15.45■□□□□ 0.06
COL9A1-201ENST00000320755 LOC105371267A0A1B0GV96 52 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 C13orf42A0A1B0GVH6 325 aa15.44■□□□□ 0.06
COL9A1-201ENST00000320755 CD74P04233 296 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms