RNA–Protein interactions for RNA: ENST00000315732.2

LSM10-201, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM10, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-201ENST00000315732 ATF6BQ99941 703 aa12.31□□□□□ -0.44
LSM10-201ENST00000315732 ZNF747Q9BV97 191 aa12.31□□□□□ -0.44
LSM10-201ENST00000315732 IL1RAPQ9NPH3 570 aa12.31□□□□□ -0.44
LSM10-201ENST00000315732 TMCC3Q9ULS5 477 aa12.31□□□□□ -0.44
LSM10-201ENST00000315732 TANC2Q9HCD6 1990 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 IGHV2-70DA0A0C4DH43 119 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 IGHV3-64DA0A0J9YX35 117 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 KIR2DS1A0A191URI9 304 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 OR6C68A6NDL8 312 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 DNAJC9-AS1A6NH13 148 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 HLA-DPB1P04440 258 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 FABP3P05413 133 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 ZNF823P16415 610 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 PMELP40967 661 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 GSSP48637 474 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 TPTEP56180 551 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 TRAP1Q12931 704 aaKnown RBP12.3□□□□□ -0.44
LSM10-201ENST00000315732 TSPAN31Q12999 210 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 MAB21L1Q13394 359 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 SAMD4BQ5PRF9 694 aaKnown RBP12.3□□□□□ -0.44
LSM10-201ENST00000315732 PGAP1Q75T13 922 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 NLRC3Q7RTR2 1065 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 NAA40Q86UY6 237 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 OR8B3Q8NGG8 313 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 SPRYD4Q8WW59 207 aaPredicted RBP12.3□□□□□ -0.44
LSM10-201ENST00000315732 SLC25A28Q96A46 364 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 SLCO4A1Q96BD0 722 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 NSMCE2Q96MF7 247 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 OR8B2Q96RD0 313 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 CD300AQ9UGN4 299 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 KCNG2Q9UJ96 466 aa12.3□□□□□ -0.44
LSM10-201ENST00000315732 CLDN34H7C241 214 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 SNX3O60493 162 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 KRT36O76013 467 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 RRM2P31350 389 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 CD200P41217 278 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 DBPQ10586 325 aaPredicted RBP12.29□□□□□ -0.44
LSM10-201ENST00000315732 SLC35F1Q5T1Q4 408 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 SHISA2Q6UWI4 295 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 C9orf139Q6ZV77 190 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 PGAM4Q8N0Y7 254 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 PARP8Q8N3A8 854 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 SDR9C7Q8NEX9 313 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 OR11L1Q8NGX0 322 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 Q8TCH9 128 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 SPTSSAQ969W0 71 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 UPRTQ96BW1 309 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 ZNF48Q96MX3 618 aaPredicted RBP12.29□□□□□ -0.44
LSM10-201ENST00000315732 DUX5Q96PT3 197 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 CDRT15Q96T59 188 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 SLC22A4Q9H015 551 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 NSRP1Q9H0G5 558 aaKnown RBP12.29□□□□□ -0.44
LSM10-201ENST00000315732 PNRC2Q9NPJ4 139 aaKnown RBP12.29□□□□□ -0.44
LSM10-201ENST00000315732 NOP16Q9Y3C1 178 aaKnown RBP12.29□□□□□ -0.44
LSM10-201ENST00000315732 PCDHGB1Q9Y5G3 927 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 TRRAPQ9Y4A5 3859 aa12.29□□□□□ -0.44
LSM10-201ENST00000315732 RNASE1P07998 156 aaKnown RBP12.28□□□□□ -0.44
LSM10-201ENST00000315732 IGHV4-38-2P0DP08 117 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 MSX2P35548 267 aaPredicted RBP12.28□□□□□ -0.44
LSM10-201ENST00000315732 PITPNBP48739 271 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 HMGA2P52926 109 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 RAD23AP54725 363 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.28□□□□□ -0.44
LSM10-201ENST00000315732 FAM201AQ5SY85 155 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 RPL13AP3Q6NVV1 102 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 PGBD2Q6P3X8 592 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 ZNF620Q6ZNG0 422 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 DCDC5Q6ZRR9 648 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 MRPL21Q7Z2W9 205 aaKnown RBP12.28□□□□□ -0.44
LSM10-201ENST00000315732 CPLX4Q7Z7G2 160 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 ZDHHC21Q8IVQ6 265 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 DACT3Q96B18 629 aaPredicted RBP12.28□□□□□ -0.44
LSM10-201ENST00000315732 MAP6Q96JE9 813 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 C1orf147Q96MC9 270 aaPredicted RBP12.28□□□□□ -0.44
LSM10-201ENST00000315732 DDOQ99489 341 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 NUDT16L1Q9BRJ7 211 aaKnown RBP12.28□□□□□ -0.44
LSM10-201ENST00000315732 FAM107BQ9H098 131 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 FN3KQ9H479 309 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 MRPL22Q9NWU5 206 aaKnown RBP12.28□□□□□ -0.44
LSM10-201ENST00000315732 CLN8Q9UBY8 286 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 MGAM2Q2M2H8 2515 aa12.28□□□□□ -0.44
LSM10-201ENST00000315732 CD300LBA8K4G0 201 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 M0R135 149 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 ARPC2O15144 300 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 ATP8B1O43520 1251 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 GMDSO60547 372 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 PLATP00750 562 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 PRSS12P56730 875 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 SLC9A3R2Q15599 337 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 OR8G1Q15617 311 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 KCNJ8Q15842 424 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 SPATS1Q496A3 300 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 CLEC12AQ5QGZ9 265 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 WDR25Q64LD2 544 aaPredicted RBP12.27□□□□□ -0.45
LSM10-201ENST00000315732 LINC00471Q8N535 108 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 PLPP7Q8NBV4 271 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 OR52L1Q8NGH7 329 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 OR2T4Q8NH00 348 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 ZNF799Q96GE5 643 aa12.27□□□□□ -0.45
LSM10-201ENST00000315732 FN3KRPQ9HA64 309 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms