RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SIGLEC14Q08ET2 396 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 IKZF1Q13422 519 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 OR2Y1Q8NGV0 311 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ALKBH3Q96Q83 286 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 FOXB1Q99853 325 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 TRAPPC2LH3BP13 241 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 CCL3P10147 92 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 NFYAP23511 347 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 GK2Q14410 553 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ELFN2Q5R3F8 820 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ZNRF4Q8WWF5 429 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ZNF416Q9BWM5 594 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ZCCHC4Q9H5U6 513 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ZNF175Q9Y473 711 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 OTOFQ9HC10 1997 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ANGPTL7O43827 346 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 TSPAN2O60636 221 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ZNF616Q08AN1 781 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ZNF585AQ6P3V2 769 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 C17orf107Q6ZR85 190 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 OR51A2Q8NGJ7 313 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 STOML3Q8TAV4 291 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 LIN37Q96GY3 246 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 CRLF2Q9HC73 371 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 CCDC163A0A0D9SF12 145 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 GDF9O60383 454 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ZNF728P0DKX0 622 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 MN1Q10571 1320 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 MDC1Q14676 2089 aaKnown RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 SLC25A21Q9BQT8 299 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 NXF2Q9GZY0 626 aaKnown RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 IGKV1D-42A0A075B6H8 117 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 SHISA3A0PJX4 238 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 GLSO94925 669 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ACSM4P0C7M7 580 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 GLI4P10075 376 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 B4GALT1P15291 398 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 OR52W1Q6IF63 320 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 OR5AS1Q8N127 324 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 MCHR2Q969V1 340 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 GLTPQ9NZD2 209 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 NTMQ9P121 344 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ATPIF1Q9UII2 106 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 AGPAT2O15120 278 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 TSNAXQ99598 290 aaKnown RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 OBP2BQ9NPH6 170 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 KCNIP1Q9NZI2 227 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 FBXO4Q9UKT5 387 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 CCDC187A0A096LP49 1063 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ITGB2P05107 769 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 TPOP07202 933 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ASAH2BP0C7U1 165 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 FOXK1P85037 733 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 OR2AE1Q8NHA4 323 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ZFAND1Q8TCF1 268 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 PPP1R3EQ9H7J1 279 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 ASF1BQ9NVP2 202 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 KLF4O43474 513 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 FADS1O60427 444 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 OR8U9P0C7N5 309 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 UBBP0CG47 229 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 EPHA1P21709 976 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 OPRM1P35372 400 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 RRADP55042 308 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 PPIAP62937 165 aaKnown RBP5.53□□□□□ -1.52
PRKDC-201ENST00000314191 RTL6Q6ICC9 239 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 SAP25Q8TEE9 199 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 YIPF5Q969M3 257 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 TMEM9BQ9NQ34 198 aa5.53□□□□□ -1.52
PRKDC-201ENST00000314191 A0A0B4J2A0 478 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 DXOO77932 396 aaKnown RBP5.52□□□□□ -1.53
PRKDC-201ENST00000314191 PET100P0DJ07 73 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 MFGE8Q08431 387 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-201ENST00000314191 PDCD1Q15116 288 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 C3AR1Q16581 482 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 OR2M3Q8NG83 312 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 FNDC9Q8TBE3 224 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 UCN2Q96RP3 112 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 KCNJ15Q99712 375 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 SHPKQ9UHJ6 478 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 SPTBN1Q01082 2364 aaKnown RBP5.52□□□□□ -1.53
PRKDC-201ENST00000314191 SHISA7A6NL88 538 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 SLC34A2O95436 690 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 AKR1C2P52895 323 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 EGR4Q05215 589 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 SLC10A1Q14973 349 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 ZNF286AQ9HBT8 521 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 DUSP13Q9UII6 198 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 PRRC2BQ5JSZ5 2229 aaKnown RBP5.52□□□□□ -1.53
PRKDC-201ENST00000314191 PYCARD-AS1I3L0S3 204 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 SERPINA7P05543 415 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 CELA2AP08217 269 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 KIR3DL2P43630 455 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 ARF1P84077 181 aaKnown RBP5.52□□□□□ -1.53
PRKDC-201ENST00000314191 DEFB124Q8NES8 71 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 KCNE4Q8WWG9 221 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 DNASE2BQ8WZ79 361 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 TINAGL1Q9GZM7 467 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-201ENST00000314191 DOCK11Q5JSL3 2073 aa5.52□□□□□ -1.53
PRKDC-201ENST00000314191 MOB1AQ9H8S9 216 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms