RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 A0A075B6Q4 140 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 PDCD5O14737 125 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 TBX1O43435 398 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 LYZL6O75951 148 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 CGAP01215 116 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 BMXP51813 675 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 MOGQ16653 247 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 LINC00299Q6ZSB3 139 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 PRSS45Q7RTY3 260 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 SFXN3Q9BWM7 321 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 SP140LQ9H930 580 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 PLEKHB1Q9UF11 243 aaPredicted RBP19.66■□□□□ 0.74
IRF3-201ENST00000309877 ATPIF1Q9UII2 106 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 TINAGQ9UJW2 476 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 ARHGAP21Q5T5U3 1957 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 CHD8Q9HCK8 2581 aa19.66■□□□□ 0.74
IRF3-201ENST00000309877 RAD51DO75771 328 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 S100A5P33763 92 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 PLP2Q04941 152 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 LY6DQ14210 128 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 GFOD2Q3B7J2 385 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 SFRP5Q5T4F7 317 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 CROCCP3Q8IVE0 287 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 CCDC36Q8IYA8 594 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 ZNF433Q8N7K0 673 aaPredicted RBP19.65■□□□□ 0.74
IRF3-201ENST00000309877 CPEB3Q8NE35 698 aaKnown RBP19.65■□□□□ 0.74
IRF3-201ENST00000309877 ZNF319Q9P2F9 582 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 SH3BGRL2Q9UJC5 107 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 DOCK7Q96N67 2140 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 IQCMA0A1B0GVH7 501 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 ZNF503-AS2A6NEH8 195 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 UBE2NP61088 152 aaKnown RBP19.65■□□□□ 0.74
IRF3-201ENST00000309877 PMPCAQ10713 525 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 GSG1Q2KHT4 349 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 KRTAP27-1Q3LI81 207 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 BEND4Q6ZU67 534 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 GABRG1Q8N1C3 465 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 OR10A2Q9H208 303 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 SMURF1Q9HCE7 757 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 PEX16Q9Y5Y5 336 aa19.65■□□□□ 0.74
IRF3-201ENST00000309877 ANKRD61A6NGH8 418 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 LCATP04180 440 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 COX5BP10606 129 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 COX5AP20674 150 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 APEX1P27695 318 aaKnown RBP19.64■□□□□ 0.73
IRF3-201ENST00000309877 OR10A3P58181 314 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 GABRA6Q16445 453 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 NR2C2APQ86WQ0 139 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 OR52H1Q8NGJ2 320 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 NOX3Q9HBY0 568 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 GPR84Q9NQS5 396 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 CKLFQ9UBR5 152 aa19.64■□□□□ 0.73
IRF3-201ENST00000309877 AK6Q9Y3D8 172 aaKnown RBP19.64■□□□□ 0.73
IRF3-201ENST00000309877 A0A1B0GTI1 187 aa19.63■□□□□ 0.73
IRF3-201ENST00000309877 ERVH48-1M5A8F1 160 aa19.63■□□□□ 0.73
IRF3-201ENST00000309877 CFL1P23528 166 aaKnown RBP19.63■□□□□ 0.73
IRF3-201ENST00000309877 P2RY6Q15077 328 aa19.63■□□□□ 0.73
IRF3-201ENST00000309877 IDNKQ5T6J7 187 aa19.63■□□□□ 0.73
IRF3-201ENST00000309877 SFXN4Q6P4A7 337 aa19.63■□□□□ 0.73
IRF3-201ENST00000309877 STAC2Q6ZMT1 411 aa19.63■□□□□ 0.73
IRF3-201ENST00000309877 DOK3Q7L591 496 aa19.63■□□□□ 0.73
IRF3-201ENST00000309877 C1orf162Q8NEQ5 155 aaPredicted RBP19.63■□□□□ 0.73
IRF3-201ENST00000309877 B3GNT2Q9NY97 397 aa19.63■□□□□ 0.73
IRF3-201ENST00000309877 SPENQ96T58 3664 aaKnown RBP19.62■□□□□ 0.73
IRF3-201ENST00000309877 A0A0U1RQV5 110 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 NOTOA8MTQ0 251 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 RGS5O15539 181 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 HOXB1P14653 301 aaPredicted RBP19.62■□□□□ 0.73
IRF3-201ENST00000309877 STOMP27105 288 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 HOXC12P31275 282 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 CXorf67Q86X51 503 aaPredicted RBP19.62■□□□□ 0.73
IRF3-201ENST00000309877 FAM71F1Q96KD3 344 aaPredicted RBP19.62■□□□□ 0.73
IRF3-201ENST00000309877 ZNF275Q9NSD4 429 aaPredicted RBP19.62■□□□□ 0.73
IRF3-201ENST00000309877 TRAV8-7A0A075B6U6 113 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 E9PLN8 166 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 CTDSP2O14595 271 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 MAS1P04201 325 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 ZNF12P17014 697 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 ANOS1P23352 680 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 OPRM1P35372 400 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 HGFACQ04756 655 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 TSC22D1Q15714 1073 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 CEP78Q5JTW2 689 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 MZT2AQ6P582 158 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 MDP1Q86V88 176 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 S100ZQ8WXG8 99 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 FGGYQ96C11 551 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 DAPK2Q9UIK4 370 aa19.62■□□□□ 0.73
IRF3-201ENST00000309877 A0A0G2JK05 382 aa19.61■□□□□ 0.73
IRF3-201ENST00000309877 C5orf63A6NC05 138 aa19.61■□□□□ 0.73
IRF3-201ENST00000309877 CCL1P22362 96 aa19.61■□□□□ 0.73
IRF3-201ENST00000309877 CCNOP22674 350 aa19.61■□□□□ 0.73
IRF3-201ENST00000309877 CASP6P55212 293 aa19.61■□□□□ 0.73
IRF3-201ENST00000309877 SNAI3Q3KNW1 292 aa19.61■□□□□ 0.73
IRF3-201ENST00000309877 ACOT12Q8WYK0 555 aa19.61■□□□□ 0.73
IRF3-201ENST00000309877 CEP19Q96LK0 163 aa19.61■□□□□ 0.73
IRF3-201ENST00000309877 FOXJ3Q9UPW0 622 aa19.61■□□□□ 0.73
IRF3-201ENST00000309877 LOC100509620A0A075B734 347 aa19.6■□□□□ 0.73
IRF3-201ENST00000309877 C5orf49A4QMS7 147 aa19.6■□□□□ 0.73
IRF3-201ENST00000309877 ANXA2P2A6NMY6 339 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms