RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 MRPL3P09001 348 aaKnown RBP16.93■□□□□ 0.3
VEGFB-201ENST00000309422 KITLGP21583 273 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 SLC2A5P22732 501 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 CFL1P23528 166 aaKnown RBP16.93■□□□□ 0.3
VEGFB-201ENST00000309422 CCL8P80075 99 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 GGTLC2Q14390 218 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 TIGD6Q17RP2 521 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 KRTAP27-1Q3LI81 207 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 CLEC9AQ6UXN8 241 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 TRUB1Q8WWH5 349 aaKnown RBP16.93■□□□□ 0.3
VEGFB-201ENST00000309422 ASB17Q8WXJ9 295 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 HAVCR1Q96D42 359 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 TEAD3Q99594 435 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 MROQ9BYG7 248 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 WARS2Q9UGM6 360 aaKnown RBP16.93■□□□□ 0.3
VEGFB-201ENST00000309422 GMPPBQ9Y5P6 360 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 ARID1AO14497 2285 aa16.93■□□□□ 0.3
VEGFB-201ENST00000309422 M0R129 80 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 HEXAP06865 529 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 TNFRSF1AP19438 455 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 USF1P22415 310 aaPredicted RBP16.92■□□□□ 0.3
VEGFB-201ENST00000309422 EPHA2P29317 976 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 MAGEB1P43366 347 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 SLC3A1Q07837 685 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 RCN1Q15293 331 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 TRIP10Q15642 601 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 HFEQ30201 348 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 ZIK1Q3SY52 487 aaPredicted RBP16.92■□□□□ 0.3
VEGFB-201ENST00000309422 DNM1P46Q6ZS02 220 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 OR5AS1Q8N127 324 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 ZNF555Q8NEP9 628 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 OR2Z1Q8NG97 314 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 OR52H1Q8NGJ2 320 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 TIMD4Q96H15 378 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 OR10A2Q9H208 303 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 DNAJC27Q9NZQ0 273 aa16.92■□□□□ 0.3
VEGFB-201ENST00000309422 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.92■□□□□ 0.3
VEGFB-201ENST00000309422 GGT3PA6NGU5 568 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 ZNF670-ZNF695F2Z2N8 137 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 MPZL2O60487 215 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 GPR6P46095 362 aaPredicted RBP16.91■□□□□ 0.3
VEGFB-201ENST00000309422 MMP15P51511 669 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 TNFAIP6P98066 277 aaPredicted RBP16.91■□□□□ 0.3
VEGFB-201ENST00000309422 HLXQ14774 488 aaPredicted RBP16.91■□□□□ 0.3
VEGFB-201ENST00000309422 SNCBQ16143 134 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 OR2T2Q6IF00 324 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 COLCA1Q6ZS62 124 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 PEG10Q86TG7 708 aaKnown RBP16.91■□□□□ 0.3
VEGFB-201ENST00000309422 FTMTQ8N4E7 242 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 OR10S1Q8NGN2 331 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 OR13G1Q8NGZ3 307 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 PGAM5Q96HS1 289 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 RDH12Q96NR8 316 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 POFUT1Q9H488 388 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 MSL2Q9HCI7 577 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 IKZF2Q9UKS7 526 aa16.91■□□□□ 0.3
VEGFB-201ENST00000309422 IGHV1-69-2A0A0G2JMI3 117 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 ZSCAN5BA6NJL1 495 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 CLDN25C9JDP6 229 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 IGHV1-46P01743 117 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 HPXP02790 462 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 OTX1P32242 354 aaPredicted RBP16.9■□□□□ 0.3
VEGFB-201ENST00000309422 NR4A2P43354 598 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 TMED1Q13445 227 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 ZNF829Q3KNS6 432 aaPredicted RBP16.9■□□□□ 0.3
VEGFB-201ENST00000309422 MEDAGQ5VYS4 303 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 USP51Q70EK9 711 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 BHLHE23Q8NDY6 225 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 HRASLS5Q96KN8 279 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 BPESC1Q9GZL8 116 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 SLC22A4Q9H015 551 aa16.9■□□□□ 0.3
VEGFB-201ENST00000309422 CCDC182A6NF36 153 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 PPIHO43447 177 aaKnown RBP16.89■□□□□ 0.3
VEGFB-201ENST00000309422 SLC2A1P11166 492 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 PSKH1P11801 424 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 HTR1FP30939 366 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 POLR2IP36954 125 aaKnown RBP16.89■□□□□ 0.3
VEGFB-201ENST00000309422 OPRL1P41146 370 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 CHN2P52757 468 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 PSMA6P60900 246 aaKnown RBP16.89■□□□□ 0.3
VEGFB-201ENST00000309422 GK2Q14410 553 aaPredicted RBP16.89■□□□□ 0.3
VEGFB-201ENST00000309422 GFOD2Q3B7J2 385 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 AADACL4Q5VUY2 407 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 SLC35F2Q8IXU6 374 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 CIARTQ8N365 385 aaPredicted RBP16.89■□□□□ 0.3
VEGFB-201ENST00000309422 OR8G5Q8NG78 346 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 OR51G2Q8NGK0 314 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 Q96MT0 163 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 MYCBPQ99417 103 aaPredicted RBP16.89■□□□□ 0.3
VEGFB-201ENST00000309422 APOL4Q9BPW4 351 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 RGCCQ9H4X1 137 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 BRD7Q9NPI1 651 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 TMEM100Q9NV29 134 aa16.89■□□□□ 0.3
VEGFB-201ENST00000309422 SMPD3Q9NY59 655 aaPredicted RBP16.89■□□□□ 0.3
VEGFB-201ENST00000309422 ITPR3Q14573 2671 aa16.89■□□□□ 0.29
VEGFB-201ENST00000309422 IQCF6A8MYZ5 107 aa16.89■□□□□ 0.29
VEGFB-201ENST00000309422 H0YHG0 523 aa16.89■□□□□ 0.29
VEGFB-201ENST00000309422 CDC14BO60729 498 aa16.89■□□□□ 0.29
VEGFB-201ENST00000309422 ZNF254O75437 659 aa16.89■□□□□ 0.29
VEGFB-201ENST00000309422 ADH4P08319 380 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms