RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SLC25A37Q9NYZ2 338 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 HCFC2Q9Y5Z7 792 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 BTBD17A6NE02 478 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 FCMRO60667 390 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 SNCGO76070 127 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 HAAOP46952 286 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 GPR12P47775 334 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 CSNK1G2P78368 415 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 PLXDC2Q6UX71 529 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 OLIG1Q8TAK6 271 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 SLAMF6Q96DU3 332 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 MN1Q10571 1320 aaPredicted RBP11.49□□□□□ -0.57
USP38-201ENST00000307017 KLKB1P03952 638 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 DAOP14920 347 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 NPPBP16860 134 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 CPEP16870 476 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 RPL12P30050 165 aaKnown RBP11.49□□□□□ -0.57
USP38-201ENST00000307017 ETFDHQ16134 617 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 B3GNTL1Q67FW5 361 aaPredicted RBP11.49□□□□□ -0.57
USP38-201ENST00000307017 TMEM81Q6P7N7 255 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 WDR5BQ86VZ2 330 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 A4GALTQ9NPC4 353 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 ACER3Q9NUN7 267 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 TMEM140Q9NV12 185 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 ADAM23O75077 832 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 GLRA1P23415 457 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 HENMT1Q5T8I9 393 aaKnown RBP11.49□□□□□ -0.57
USP38-201ENST00000307017 DRAM2Q6UX65 266 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 CNTN4Q8IWV2 1026 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 OR6S1Q8NH40 331 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 SMIM7Q9BQ49 75 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 TMEM204Q9BSN7 226 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 P4HTMQ9NXG6 502 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 hCG_1809904A0A1W2PP81 198 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 A0A1W2PR64 198 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 ZNF814B7Z6K7 855 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 RBP4P02753 201 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 RAF1P04049 648 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 EN2P19622 333 aaPredicted RBP11.49□□□□□ -0.57
USP38-201ENST00000307017 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
USP38-201ENST00000307017 LIMK1P53667 647 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 ZNF92Q03936 586 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 LPCAT3Q6P1A2 487 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 DLEU7Q6UYE1 221 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 PLPP6Q8IY26 295 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 PPP1R1CQ8WVI7 109 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 AURKAIP1Q9NWT8 199 aaPredicted RBP11.49□□□□□ -0.57
USP38-201ENST00000307017 KPTNQ9Y664 436 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 ECM29Q5VYK3 1845 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 SPRY3O43610 288 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 LALBAP00709 142 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 CALCRP30988 508 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 G6PCP35575 357 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 PELI3Q8N2H9 469 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 ONECUT1Q9UBC0 465 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 A0A1W2PR48 441 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 PYCARD-AS1I3L0S3 204 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 ETHE1O95571 254 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 RPL13AP40429 203 aaKnown RBP11.48□□□□□ -0.57
USP38-201ENST00000307017 CXCL12P48061 93 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 B3GNT9Q6UX72 402 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 C10orf90Q96M02 699 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 EDEM2Q9BV94 578 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 SLC2A11Q9BYW1 496 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 NPAP1Q9NZP6 1156 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 TRAPPC1Q9Y5R8 145 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 CCDC88CQ9P219 2028 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 CSN3P07498 182 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 PARM1Q6UWI2 310 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 PBX4Q9BYU1 374 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 PDLIM7Q9NR12 457 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 KCNE3Q9Y6H6 103 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 KIAA1324LA8MWY0 1029 aaPredicted RBP11.48□□□□□ -0.57
USP38-201ENST00000307017 MT-ND4LP03901 98 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 B4GALT1P15291 398 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 HTR3DQ70Z44 454 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 ISOC2Q96AB3 205 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 CXorf58Q96LI9 332 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 C1QTNF3Q9BXJ4 246 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 IL17BQ9UHF5 180 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 GDF2Q9UK05 429 aaPredicted RBP11.48□□□□□ -0.57
USP38-201ENST00000307017 TMEM221A6NGB7 291 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 ABLIM3O94929 683 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 DRD1P21728 446 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 SULT1A2P50226 295 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 TMEM43Q9BTV4 400 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 TMPRSS5Q9H3S3 457 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 BCO1Q9HAY6 547 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 FSCN3Q9NQT6 498 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 OR51B4Q9Y5P0 310 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 SCN3AQ9NY46 2000 aa11.48□□□□□ -0.57
USP38-201ENST00000307017 TCRBV16S1A1N1A0A5B0 115 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 H7BYZ3 331 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 CLDN10P78369 228 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 SLC35A1P78382 337 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 PMS2P11Q13670 270 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 GTF2H5Q6ZYL4 71 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 UBE3DQ7Z6J8 389 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms