RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 OR2AJ1Q8NGZ0 328 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 NEIL1Q96FI4 390 aaPredicted RBP17.14■□□□□ 0.33
RER1-201ENST00000306256 PNRC2Q9NPJ4 139 aaKnown RBP17.14■□□□□ 0.33
RER1-201ENST00000306256 MRPL22Q9NWU5 206 aaKnown RBP17.14■□□□□ 0.33
RER1-201ENST00000306256 MIOXQ9UGB7 285 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 CYB5R1Q9UHQ9 305 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 TRAV40A0A0B4J280 105 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 A0A1B0GWJ7 208 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 LRRC30A6NM36 301 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 RRM2P31350 389 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 GSSP48637 474 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 HOXA4Q00056 320 aaPredicted RBP17.13■□□□□ 0.33
RER1-201ENST00000306256 MAB21L1Q13394 359 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 ZNF181Q2M3W8 571 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 SLC35F1Q5T1Q4 408 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 PRAMEF6Q5VXH4 476 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 ZNF620Q6ZNG0 422 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 C1orf87Q8N0U7 546 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 OR8B3Q8NGG8 313 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 TAF15Q92804 592 aaKnown RBP eCLIP17.13■□□□□ 0.338e-7■■□□□ 11.8
RER1-201ENST00000306256 DACT3Q96B18 629 aaPredicted RBP17.13■□□□□ 0.33
RER1-201ENST00000306256 SLCO4A1Q96BD0 722 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 OR8B2Q96RD0 313 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 CDADC1Q9BWV3 514 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 UFSP2Q9NUQ7 469 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 MAGEL2Q9UJ55 1249 aa17.13■□□□□ 0.33
RER1-201ENST00000306256 ARPC2O15144 300 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 WIPF1O43516 503 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 FAM20BO75063 409 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 HSD17B1P14061 328 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 ANOS1P23352 680 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 PYCR1P32322 319 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 RPS27P42677 84 aaKnown RBP17.12■□□□□ 0.33
RER1-201ENST00000306256 GATA4P43694 442 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 PITPNBP48739 271 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.12■□□□□ 0.33
RER1-201ENST00000306256 ECH1Q13011 328 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 CLEC12AQ5QGZ9 265 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 LYPD2Q6UXB3 125 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 LRRN1Q6UXK5 716 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 RAB40AQ8WXH6 277 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 MCUR1Q96AQ8 359 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 UPRTQ96BW1 309 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 PLEKHA8Q96JA3 519 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 MAP6Q96JE9 813 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 NSMCE2Q96MF7 247 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 ZNF747Q9BV97 191 aa17.12■□□□□ 0.33
RER1-201ENST00000306256 ZMAT3Q9HA38 289 aaKnown RBP17.12■□□□□ 0.33
RER1-201ENST00000306256 MDFIC2A0A1B0GVS7 189 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 TMPRSS2O15393 492 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 FABP3P05413 133 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 RNASE1P07998 156 aaKnown RBP17.11■□□□□ 0.33
RER1-201ENST00000306256 IRF2P14316 349 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 CPT2P23786 658 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 MALLQ13021 153 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 MPPED2Q15777 294 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 PGBD2Q6P3X8 592 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 PGAP1Q75T13 922 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 NLRC3Q7RTR2 1065 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 MRPL21Q7Z2W9 205 aaKnown RBP17.11■□□□□ 0.33
RER1-201ENST00000306256 CYB561A3Q8NBI2 242 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 OR10S1Q8NGN2 331 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 GNPDA2Q8TDQ7 276 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 EGLN3Q9H6Z9 239 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 TMCC3Q9ULS5 477 aa17.11■□□□□ 0.33
RER1-201ENST00000306256 C5orf63A6NC05 138 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 TVP23AA6NH52 213 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 M0R135 149 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 IDH3BO43837 385 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 PLATP00750 562 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 PPIAL4GP0DN37 164 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 PSKH1P11801 424 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 IFNGR2P38484 337 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 CD200P41217 278 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 RAD23AP54725 363 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 TPTEP56180 551 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 TSPAN31Q12999 210 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 SLC9A3R2Q15599 337 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 SNAI3Q3KNW1 292 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 LYPD4Q6UWN0 246 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 PGAM4Q8N0Y7 254 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 OR11L1Q8NGX0 322 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 OR2AE1Q8NHA4 323 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 Q8TCH9 128 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 SPRYD4Q8WW59 207 aaPredicted RBP17.1■□□□□ 0.33
RER1-201ENST00000306256 SLC25A28Q96A46 364 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 ZNF799Q96GE5 643 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 CDRT15Q96T59 188 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 NUDT16L1Q9BRJ7 211 aaKnown RBP17.1■□□□□ 0.33
RER1-201ENST00000306256 NSRP1Q9H0G5 558 aaKnown RBP17.1■□□□□ 0.33
RER1-201ENST00000306256 CLN8Q9UBY8 286 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 CD300AQ9UGN4 299 aa17.1■□□□□ 0.33
RER1-201ENST00000306256 SNX3O60493 162 aa17.09■□□□□ 0.33
RER1-201ENST00000306256 FSTL3O95633 263 aa17.09■□□□□ 0.33
RER1-201ENST00000306256 CA6P23280 308 aa17.09■□□□□ 0.33
RER1-201ENST00000306256 MTNR1AP48039 350 aa17.09■□□□□ 0.33
RER1-201ENST00000306256 OR8G1Q15617 311 aa17.09■□□□□ 0.33
RER1-201ENST00000306256 SAMD4BQ5PRF9 694 aaKnown RBP17.09■□□□□ 0.33
RER1-201ENST00000306256 WDR25Q64LD2 544 aaPredicted RBP17.09■□□□□ 0.33
RER1-201ENST00000306256 SHISA2Q6UWI4 295 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms