RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 AKIP1Q9NQ31 210 aa11.35□□□□□ -0.59
CCDC7-202ENST00000302316 PROCRQ9UNN8 238 aa11.35□□□□□ -0.59
CCDC7-202ENST00000302316 AK6Q9Y3D8 172 aaKnown RBP11.35□□□□□ -0.59
CCDC7-202ENST00000302316 A0A0G2JK05 382 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 ZNF503-AS2A6NEH8 195 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 CLDN25C9JDP6 229 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 TBX1O43435 398 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 CNOT4O95628 575 aaKnown RBP11.34□□□□□ -0.59
CCDC7-202ENST00000302316 HOXD4P09016 255 aaPredicted RBP11.34□□□□□ -0.59
CCDC7-202ENST00000302316 BMP4P12644 408 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 IGHV1-2P23083 117 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 TGFBR3Q03167 851 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 GTF3C1Q12789 2109 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 EIF2S3LQ2VIR3 472 aaKnown RBP11.34□□□□□ -0.59
CCDC7-202ENST00000302316 DRAM2Q6UX65 266 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 BTLAQ7Z6A9 289 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 ZNF433Q8N7K0 673 aaPredicted RBP11.34□□□□□ -0.59
CCDC7-202ENST00000302316 NANOS1Q8WY41 292 aaKnown RBP11.34□□□□□ -0.59
CCDC7-202ENST00000302316 CEP19Q96LK0 163 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 TP63Q9H3D4 680 aaPredicted RBP11.34□□□□□ -0.59
CCDC7-202ENST00000302316 ZNF319Q9P2F9 582 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 DAPK2Q9UIK4 370 aa11.34□□□□□ -0.59
CCDC7-202ENST00000302316 DSPP15924 2871 aaKnown RBP11.34□□□□□ -0.59
CCDC7-202ENST00000302316 TLN1Q9Y490 2541 aaKnown RBP11.33□□□□□ -0.6
CCDC7-202ENST00000302316 TRAV8-7A0A075B6U6 113 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 NOTOA8MTQ0 251 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 UBL3O95164 117 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 CRHP06850 196 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 SLC25A35Q3KQZ1 300 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 TBRG1Q3YBR2 411 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 TMEM53Q6P2H8 277 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 STAC2Q6ZMT1 411 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 NAXEQ8NCW5 288 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 BCL2L2Q92843 193 aaPredicted RBP11.33□□□□□ -0.6
CCDC7-202ENST00000302316 STARD4Q96DR4 205 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 ZFP3Q96NJ6 502 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 WDR12Q9GZL7 423 aaKnown RBP11.33□□□□□ -0.6
CCDC7-202ENST00000302316 NOX3Q9HBY0 568 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 GPR84Q9NQS5 396 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 COMMD3Q9UBI1 195 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 CKLFQ9UBR5 152 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 ATPIF1Q9UII2 106 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 CMAHPQ9Y471 501 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 MAP1BP46821 2468 aaKnown RBP11.33□□□□□ -0.6
CCDC7-202ENST00000302316 A0A1B0GTI1 187 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 CIB4A0PJX0 185 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 E9PLN8 166 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 LMX1BO60663 402 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 SLC19A2O60779 497 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 RAD51DO75771 328 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 LYZL6O75951 148 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 MAS1P04201 325 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 TIMP3P35625 211 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 ARR3P36575 388 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 RAB1AP62820 205 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 HGFACQ04756 655 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF846Q147U1 533 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 DDI2Q5TDH0 399 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 DPPA2Q7Z7J5 298 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 LAX1Q8IWV1 398 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 MFSD4AQ8N468 514 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 CPEB3Q8NE35 698 aaKnown RBP11.33□□□□□ -0.6
CCDC7-202ENST00000302316 FAM71F1Q96KD3 344 aaPredicted RBP11.33□□□□□ -0.6
CCDC7-202ENST00000302316 PLSCR4Q9NRQ2 329 aa11.33□□□□□ -0.6
CCDC7-202ENST00000302316 C5orf63A6NC05 138 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 ANXA2P2A6NMY6 339 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 TTLL8A6PVC2 850 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 EPXP11678 715 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 APEX1P27695 318 aaKnown RBP11.32□□□□□ -0.6
CCDC7-202ENST00000302316 SNAI3Q3KNW1 292 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 KRTAP27-1Q3LI81 207 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 MZT2AQ6P582 158 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 DOK3Q7L591 496 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 LRRTM1Q86UE6 522 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
CCDC7-202ENST00000302316 OR52H1Q8NGJ2 320 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 ACOT12Q8WYK0 555 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 OPN3Q9H1Y3 402 aaPredicted RBP11.32□□□□□ -0.6
CCDC7-202ENST00000302316 OR10A2Q9H208 303 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 ABCB9Q9NP78 766 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 ZNF275Q9NSD4 429 aaPredicted RBP11.32□□□□□ -0.6
CCDC7-202ENST00000302316 TAS2R4Q9NYW5 299 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 TINAGQ9UJW2 476 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 A0A0U1RQV5 110 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 J3QRK9 145 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 LCATP04180 440 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 SLC2A2P11168 524 aaPredicted RBP11.32□□□□□ -0.6
CCDC7-202ENST00000302316 ADRA2CP18825 462 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 FSTP19883 344 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 COX5AP20674 150 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 CCL1P22362 96 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 RBPJQ06330 500 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 GSG1Q2KHT4 349 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 ASPHD2Q6ICH7 369 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 DOLPP1Q86YN1 238 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 FGGYQ96C11 551 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 KCTD12Q96CX2 325 aaKnown RBP11.32□□□□□ -0.6
CCDC7-202ENST00000302316 GFI1Q99684 422 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 SLC30A2Q9BRI3 323 aa11.32□□□□□ -0.6
CCDC7-202ENST00000302316 SOX7Q9BT81 388 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms