RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 LIN54Q6MZP7 749 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 WDR74Q6RFH5 385 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-204ENST00000300862 MISPQ8IVT2 679 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 TMEM229BQ8NBD8 167 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 OR10H5Q8NGA6 315 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 OR13C9Q8NGT0 318 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 RNF133Q8WVZ7 376 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 WDR77Q9BQA1 342 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-204ENST00000300862 POTEKPQ9BYX7 375 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 FAM206AQ9NX38 181 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 PPP4R1LQ9P1A2 415 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 RHBDD3Q9Y3P4 386 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 WDFY4Q6ZS81 3184 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 MEGF11A6BM72 1044 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF814B7Z6K7 855 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 SYT7O43581 403 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 SNAPC5O75971 98 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 EMP2P54851 167 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 ZP4Q12836 540 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 UNC119Q13432 240 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 PCK2Q16822 640 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 CDNFQ49AH0 187 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 LRRC37A5PQ49AS3 106 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 LY6G6FQ5SQ64 297 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 TMEM244Q5VVB8 128 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 FJX1Q86VR8 437 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 CARFQ8N187 725 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 PAQR4Q8N4S7 273 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-204ENST00000300862 OR13C8Q8NGS7 320 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 SLC5A6Q9Y289 635 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 PRELID3BQ9Y3B1 194 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF175Q9Y473 711 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 COL6A3P12111 3177 aa11.47□□□□□ -0.57
HIF3A-204ENST00000300862 RAB27BO00194 218 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 RAMP1O60894 148 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 SCRG1O75711 98 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 AQP8O94778 261 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 RAB3AP20336 220 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 BDKRB2P30411 391 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 SFTPDP35247 375 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF41P51814 821 aaPredicted RBP11.46□□□□□ -0.57
HIF3A-204ENST00000300862 STK11Q15831 433 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 C1orf100Q5SVJ3 147 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 C5orf46Q6UWT4 87 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF813Q6ZN06 617 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 COMMD2Q86X83 199 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 LYPD6Q86Y78 171 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF584Q8IVC4 421 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 C12orf45Q8N5I9 185 aaPredicted RBP11.46□□□□□ -0.57
HIF3A-204ENST00000300862 POC1BQ8TC44 478 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 OR51E1Q8TCB6 317 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 SEC22AQ96IW7 307 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 TGIF2Q9GZN2 237 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 PBOV1Q9GZY1 135 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 MFFQ9GZY8 342 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 UBE2ZQ9H832 354 aaPredicted RBP11.46□□□□□ -0.57
HIF3A-204ENST00000300862 METTL7AQ9H8H3 244 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 SRPK3Q9UPE1 567 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 POLR1DQ9Y2S0 133 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 KLF2Q9Y5W3 355 aaPredicted RBP11.46□□□□□ -0.57
HIF3A-204ENST00000300862 MUC3AQ02505 3323 aa11.46□□□□□ -0.57
HIF3A-204ENST00000300862 DCNP07585 359 aaKnown RBP11.46□□□□□ -0.58
HIF3A-204ENST00000300862 UBCP0CG48 685 aaKnown RBP11.46□□□□□ -0.58
HIF3A-204ENST00000300862 GNB3P16520 340 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 MMP16P51512 607 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 CXADRP78310 365 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 GFOD2Q3B7J2 385 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 C3orf33Q6P1S2 294 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 KLHL24Q6TFL4 600 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 TRAPPC6BQ86SZ2 158 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 KMT5CQ86Y97 462 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 STEAP2Q8NFT2 490 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 LRRC46Q96FV0 321 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 OR5B2Q96R09 309 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 SLC6A15Q9H2J7 730 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 CHRDQ9H2X0 955 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 CYB5R1Q9UHQ9 305 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 ATPIF1Q9UII2 106 aa11.46□□□□□ -0.58
HIF3A-204ENST00000300862 TRAV14DV4A0A0A6YYC5 116 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 ABOP16442 354 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 DHRS2Q13268 280 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 FAM74A1Q5RGS3 127 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 TMEM71Q6P5X7 295 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 OR6K3Q8NGY3 331 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 DNASE2BQ8WZ79 361 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 PCED1AQ9H1Q7 454 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 C1orf198Q9H425 327 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 VSIG4Q9Y279 399 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 MRPS17Q9Y2R5 130 aaKnown RBP11.45□□□□□ -0.58
HIF3A-204ENST00000300862 EXPH5Q8NEV8 1989 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 ARPC4-TTLL3A0A0A6YYG9 625 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 LOC390937A0A1W2PQ73 354 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 A0A1W2PQM1 296 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 SULT1C2O00338 296 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 PMS2P2O95744 297 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 HLA-AP01891 365 aaKnown RBP11.45□□□□□ -0.58
HIF3A-204ENST00000300862 VSIG8P0DPA2 414 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 CD37P11049 281 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 RPA2P15927 270 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 ARHGDIBP52566 201 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms