RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZNF85Q03923 595 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CDC20BQ86Y33 519 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CDH26Q8IXH8 852 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 C1orf87Q8N0U7 546 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TIMD4Q96H15 378 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PDFQ9HBH1 243 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC35D1Q9NTN3 355 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MMP17Q9ULZ9 603 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 KCNE3Q9Y6H6 103 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FER1L6Q2WGJ9 1857 aa12.31□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TAF1P21675 1872 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR6C68A6NDL8 312 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 HOXC11O43248 304 aaPredicted RBP12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 XRCC2O43543 280 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PIAS2O75928 621 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CD80P33681 288 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF90Q03938 601 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF239Q16600 458 aaKnown RBP12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DUSP6Q16828 381 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CD276Q5ZPR3 534 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SKA3Q8IX90 412 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 NDUFB11Q9NX14 153 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PLA2G3Q9NZ20 509 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SPRY3O43610 288 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZGLP1P0C6A0 271 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PLA1AQ53H76 456 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ST8SIA4Q92187 359 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FGF14Q92915 247 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DUSP22Q9NRW4 184 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TNFRSF19Q9NS68 423 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 C2CD4DB7Z1M9 353 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 H3BMH7 237 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PRRG2O14669 202 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DFFBO76075 338 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FOXF1Q12946 379 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DUSP8Q13202 625 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DHRS4L2Q6PKH6 230 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CMC2Q9NRP2 79 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PRSS37A4D1T9 235 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SELEP16581 610 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 THEM4Q5T1C6 240 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 RXFP4Q8TDU9 374 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 LAT2Q9GZY6 243 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 H3BP45 60 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF354AO60765 605 aaPredicted RBP12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 HEXAP06865 529 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DTYMKP23919 212 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DCTDP32321 178 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 BSGP35613 385 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DDOSTP39656 456 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ECI1P42126 302 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 RFX2P48378 723 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FCRL6Q6DN72 434 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TCTN3Q6NUS6 607 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMEM43Q9BTV4 400 aa12.3□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TCRBV5S2A0A599 114 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 GNG10P50151 68 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF835Q9Y2P0 537 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 RAB19A4D1S5 217 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMEM200CA6NKL6 621 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PPP1R2P9O14990 202 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 YKT6O15498 198 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 EPHA2P29317 976 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SUB1P53999 127 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SEH1LQ96EE3 360 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC25A21Q9BQT8 299 aaPredicted RBP12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMPRSS13Q9BYE2 586 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC25A32Q9H2D1 315 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 UBE2ZQ9H832 354 aaPredicted RBP12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PSENENQ9NZ42 101 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FBXO4Q9UKT5 387 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 RCL1Q9Y2P8 373 aaKnown RBP12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ST8SIA3O43173 380 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 IL2RAP01589 272 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FOXC1Q12948 553 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 IL10RAQ13651 578 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 STAC2Q6ZMT1 411 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 Q6ZS52 159 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CISD2Q8N5K1 135 aaKnown RBP12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR10AD1Q8NGE0 317 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 A4GNTQ9UNA3 340 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PHIPQ8WWQ0 1821 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 CSN1S1P47710 185 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PIGPP57054 158 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TDHQ8IZJ6 230 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 KDF1Q8NAX2 398 aaPredicted RBP12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ALKBH3Q96Q83 286 aaPredicted RBP12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 HES7Q9BYE0 225 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZAR1LA6NP61 321 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TCAPO15273 167 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR5I1Q13606 314 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SPINK9Q5DT21 86 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC25A26Q70HW3 274 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 C20orf196Q8IYI0 205 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ARIH2OSQ8N7S6 290 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR4S1Q8NGB4 309 aa12.29□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DEFB108AA8MXU0 73 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PTHLHP12272 177 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZDHHC23Q8IYP9 409 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms