RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 SDR9C7Q8NEX9 313 aa14.55□□□□□ -0.08
TFF3-201ENST00000291525 SLC22A4Q9H015 551 aa14.55□□□□□ -0.08
TFF3-201ENST00000291525 WDR76Q9H967 626 aa14.55□□□□□ -0.08
TFF3-201ENST00000291525 TMEM165Q9HC07 324 aa14.55□□□□□ -0.08
TFF3-201ENST00000291525 NDE1Q9NXR1 346 aa14.55□□□□□ -0.08
TFF3-201ENST00000291525 CYB5R1Q9UHQ9 305 aa14.55□□□□□ -0.08
TFF3-201ENST00000291525 H0YL77 283 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 ARPC2O15144 300 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 SNX3O60493 162 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 HKR1P10072 659 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 PRTN3P24158 256 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 GATA4P43694 442 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 GSSP48637 474 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 PAX8Q06710 450 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.54□□□□□ -0.08
TFF3-201ENST00000291525 BAMBIQ13145 260 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 GK2Q14410 553 aaPredicted RBP14.54□□□□□ -0.08
TFF3-201ENST00000291525 ZNF404Q494X3 552 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 SPATS1Q496A3 300 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 KLF17Q5JT82 389 aaPredicted RBP14.54□□□□□ -0.08
TFF3-201ENST00000291525 PGAP1Q75T13 922 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 MRPL21Q7Z2W9 205 aaKnown RBP14.54□□□□□ -0.08
TFF3-201ENST00000291525 LINC00471Q8N535 108 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 OR52E2Q8NGJ4 325 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 SPRYD4Q8WW59 207 aaPredicted RBP14.54□□□□□ -0.08
TFF3-201ENST00000291525 SPTSSAQ969W0 71 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 TMEM246Q9BRR3 403 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 IL1RAPQ9NPH3 570 aa14.54□□□□□ -0.08
TFF3-201ENST00000291525 IGHV2-70DA0A0C4DH43 119 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 A0A1B0GWJ7 208 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 OR6C68A6NDL8 312 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 DNAJC9-AS1A6NH13 148 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 M0R135 149 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 ATP8B1O43520 1251 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 KRT36O76013 467 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 ZNF205O95201 554 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 RBMXP38159 391 aaKnown RBP14.53□□□□□ -0.08
TFF3-201ENST00000291525 CD200P41217 278 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 PITPNBP48739 271 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 TUSC1Q2TAM9 212 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 C16orf89Q6UX73 402 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 ZDHHC21Q8IVQ6 265 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 PARP8Q8N3A8 854 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 OR4C15Q8NGM1 316 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 Q8TCH9 128 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 RAB40AQ8WXH6 277 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 SLC25A28Q96A46 364 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 ZNF799Q96GE5 643 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 FN3KQ9H479 309 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 CDH10Q9Y6N8 788 aa14.53□□□□□ -0.08
TFF3-201ENST00000291525 HLA-DPB1P04440 258 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 CD80P33681 288 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 GGT2P36268 569 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 MXRA7P84157 204 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 OR8G1Q15617 311 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 KCNJ8Q15842 424 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 RSPO1Q2MKA7 263 aaPredicted RBP14.52□□□□□ -0.09
TFF3-201ENST00000291525 SLC35F1Q5T1Q4 408 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 PGBD2Q6P3X8 592 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 DCDC5Q6ZRR9 648 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 PROKR2Q8NFJ6 384 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 OR2T4Q8NH00 348 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 SLCO4A1Q96BD0 722 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 UPRTQ96BW1 309 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 CDRT15Q96T59 188 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 PNRC2Q9NPJ4 139 aaKnown RBP14.52□□□□□ -0.09
TFF3-201ENST00000291525 CLN8Q9UBY8 286 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 CD300AQ9UGN4 299 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 TAGLN3Q9UI15 199 aa14.52□□□□□ -0.09
TFF3-201ENST00000291525 TENM1Q9UKZ4 2725 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 IGHV3-64DA0A0J9YX35 117 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 PHYHO14832 338 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 PAX2Q02962 417 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 CLEC12AQ5QGZ9 265 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 SHISA2Q6UWI4 295 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 C9orf139Q6ZV77 190 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 NUDT16L1Q9BRJ7 211 aaKnown RBP14.51□□□□□ -0.09
TFF3-201ENST00000291525 ZNF747Q9BV97 191 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 FN3KRPQ9HA64 309 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 TRIM36Q9NQ86 728 aa14.51□□□□□ -0.09
TFF3-201ENST00000291525 MRPL22Q9NWU5 206 aaKnown RBP14.51□□□□□ -0.09
TFF3-201ENST00000291525 CLDN34H7C241 214 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 GMDSO60547 372 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 RNASE1P07998 156 aaKnown RBP14.5□□□□□ -0.09
TFF3-201ENST00000291525 EGR1P18146 543 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 MSX2P35548 267 aaPredicted RBP14.5□□□□□ -0.09
TFF3-201ENST00000291525 NPY4RP50391 375 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 MZT1Q08AG7 82 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 MAB21L1Q13394 359 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 DRAM2Q6UX65 266 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 BCL6BQ8N143 479 aaPredicted RBP14.5□□□□□ -0.09
TFF3-201ENST00000291525 MAP6Q96JE9 813 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 DUX5Q96PT3 197 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 ADAT1Q9BUB4 502 aaKnown RBP14.5□□□□□ -0.09
TFF3-201ENST00000291525 OPA3Q9H6K4 179 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 EGLN3Q9H6Z9 239 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 KIF17Q9P2E2 1029 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 RNF7Q9UBF6 113 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 PCDHGB1Q9Y5G3 927 aa14.5□□□□□ -0.09
TFF3-201ENST00000291525 TRAV40A0A0B4J280 105 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms