RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 GGT3PA6NGU5 568 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 LDLRAD4O15165 306 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 TCRBP04435 133 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 CST2P09228 141 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 CD46P15529 392 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF708P17019 499 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 ANOS1P23352 680 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 GIFP27352 417 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 MEOX1P50221 254 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 RRADP55042 308 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 SRYQ05066 204 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 BCL2A1Q16548 175 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 TBRG1Q3YBR2 411 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 RIPPLY2Q5TAB7 128 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 DOK3Q7L591 496 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 JAGN1Q8N5M9 183 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 OR52N4Q8NGI2 321 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 TMEM45BQ96B21 275 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 PGAM5Q96HS1 289 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 SORCS2Q96PQ0 1159 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 SOX7Q9BT81 388 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 ATG5Q9H1Y0 275 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 SLC6A15Q9H2J7 730 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 CRLF2Q9HC73 371 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 HRASLSQ9HDD0 168 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 TMEM138Q9NPI0 162 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 TMEM38BQ9NVV0 291 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 NUBP2Q9Y5Y2 271 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 TTC28Q96AY4 2481 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF318Q5VUA4 2279 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 AHCTF1Q8WYP5 2266 aa8.43□□□□□ -1.06
TRIM55-201ENST00000276573 TRAV18A0A075B6X5 111 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 IGKV3D-15A0A087WSY6 115 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ANKRD20A5PA0PJZ0 165 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 C5orf63A6NC05 138 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 NAP1L6A6NFF2 107 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 E9PLN8 166 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 F5H5K5 113 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 DHFRP00374 187 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 IGLV3-1P01715 115 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 APOC1P02654 83 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 MT-ND4P03905 459 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 GABRA1P14867 456 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ABOP16442 354 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF20P17024 532 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 RAB3AP20336 220 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 OTX1P32242 354 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-201ENST00000276573 CCR6P51684 374 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 AP3S2P59780 193 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 PPIAP62937 165 aaKnown RBP8.42□□□□□ -1.06
TRIM55-201ENST00000276573 SLC10A1Q14973 349 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ATAD3CQ5T2N8 411 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ABHD12BQ7Z5M8 362 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-201ENST00000276573 MEIOBQ8N635 442 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 OR4D6Q8NGJ1 314 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 OR14K1Q8NGZ2 314 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ABHD3Q8WU67 409 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 PHF21AQ96BD5 680 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 FAM71F1Q96KD3 344 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-201ENST00000276573 CNTD2Q9H8S5 307 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 GPR35Q9HC97 309 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 FAM86C1Q9NVL1 165 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 COPZ2Q9P299 210 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF221Q9UK13 617 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 NKX2-8O15522 239 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 RBBP9O75884 186 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 KDM4BO94953 1096 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 SYNGR4O95473 234 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 LIPCP11150 499 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 CAPZA1P52907 286 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 RAB25P57735 213 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 CEACAM16Q2WEN9 425 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 IGF2-ASQ6U949 168 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 PGAP1Q75T13 922 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 BTN2A1Q7KYR7 527 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-201ENST00000276573 VASH2Q86V25 355 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 COMMD2Q86X83 199 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 SLC22A24Q8N4F4 322 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ZBTB8BQ8NAP8 495 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ZFP62Q8NB50 900 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-201ENST00000276573 OR13C9Q8NGT0 318 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 PTX4Q96A99 478 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 LYZL4Q96KX0 146 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 UQCC2Q9BRT2 126 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF552Q9H707 407 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-201ENST00000276573 ACKR4Q9NPB9 350 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 PAQR5Q9NXK6 330 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-201ENST00000276573 PLEK2Q9NYT0 353 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 RAB22AQ9UL26 194 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 MED13Q9UHV7 2174 aa8.42□□□□□ -1.06
TRIM55-201ENST00000276573 TRAV6A0A075B6T7 132 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 A0A0U1RQV5 110 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 A8MV72 311 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 H7C417 338 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 TNFRSF10AO00220 468 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 GMDSO60547 372 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ITGB2P05107 769 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ERCC1P07992 297 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 DBHP09172 617 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms