RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CHST4Q8NCG5 386 aa8.04□□□□□ -1.12
CTDSPL-201ENST00000273179 OR4L1Q8NH43 312 aa8.04□□□□□ -1.12
CTDSPL-201ENST00000273179 PCDHB18PQ96TA0 734 aa8.04□□□□□ -1.12
CTDSPL-201ENST00000273179 SAMD10Q9BYL1 202 aa8.04□□□□□ -1.12
CTDSPL-201ENST00000273179 FZD8Q9H461 694 aa8.04□□□□□ -1.12
CTDSPL-201ENST00000273179 CYSLTR2Q9NS75 346 aa8.04□□□□□ -1.12
CTDSPL-201ENST00000273179 RBPJLQ9UBG7 517 aa8.04□□□□□ -1.12
CTDSPL-201ENST00000273179 APOC4-APOC2K7ER74 178 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 CREBL2O60519 120 aaPredicted RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 LRP3O75074 770 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 APOC2P02655 101 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 EPXP11678 715 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 NME2P22392 152 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 SRSF1Q07955 248 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 PPP1R1AQ13522 171 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 PRICKLE4Q2TBC4 344 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 TRMT10BQ6PF06 316 aaKnown RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 PARS2Q7L3T8 475 aaKnown RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 LINC01551Q86U37 167 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 OR5AR1Q8NGP9 310 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 GALNT14Q96FL9 552 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 SNX22Q96L94 193 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 MS4A10Q96PG2 267 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 ACOX2Q99424 681 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 SLC39A8Q9C0K1 460 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 SLC23A2Q9UGH3 650 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 FBXW11Q9UKB1 542 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 ARFGEF1Q9Y6D6 1849 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 TBC1D3EA0A087X179 549 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 A0A0G2JLL6 359 aaPredicted RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 WIPF3A6NGB9 483 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 G3V3Y1 287 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 RGRP47804 291 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 MARCKSL1P49006 195 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 MBLAC2Q68D91 279 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 TMEM225Q6GV28 225 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 PRRT2Q7Z6L0 340 aaPredicted RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 CILP2Q8IUL8 1156 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 ZNF485Q8NCK3 441 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 OR52I2Q8NH67 350 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 RDH14Q9HBH5 336 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 A0A0U1RRA0 63 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 OR4C45A6NMZ5 311 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 PPP5D1E7EU14 171 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 FCN3O75636 299 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 PSMB5P28074 263 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 CDC42P60953 191 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 PLCXD2Q0VAA5 305 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 MESP2Q0VG99 397 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 FUT7Q11130 342 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 ZDHHC24Q6UX98 284 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 CHRDL2Q6WN34 429 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 CADM4Q8NFZ8 388 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 SH3RF2Q8TEC5 729 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 WNT2BQ93097 391 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 WDR34Q96EX3 536 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 ZBTB45Q96K62 511 aaPredicted RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 MCRIP2Q9BUT9 160 aaKnown RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 PPP1R3EQ9H7J1 279 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 UQCC1Q9NVA1 299 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 KCNS2Q9ULS6 477 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 LDB2O43679 373 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 SLC35E2BP0CK96 405 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 SLC35E2P0CK97 266 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 CXCL8P10145 99 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 NSG1P42857 185 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 STT3BQ8TCJ2 826 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 MRAPQ8TCY5 172 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 RXFP2Q8WXD0 754 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 RGP1Q92546 391 aaPredicted RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 KISS1RQ969F8 398 aaPredicted RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 GDF15Q99988 308 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 SEMA6CQ9H3T2 930 aa8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 SOX21Q9Y651 276 aaPredicted RBP8.03□□□□□ -1.12
CTDSPL-201ENST00000273179 MKI67P46013 3256 aaKnown RBP8.02□□□□□ -1.12
CTDSPL-201ENST00000273179 UMODP07911 640 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 SFTA3P0C7M3 94 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 PTPN7P35236 360 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 NPBWR2P48146 333 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 GP2P55259 537 aaKnown RBP8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 CCL7P80098 99 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 MRPS34P82930 218 aaKnown RBP8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 PCLAFQ15004 111 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 CDHR3Q6ZTQ4 885 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 DEFB128Q7Z7B8 93 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 Q8WTZ3 238 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 TFGQ92734 400 aaPredicted RBP8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 UCN3Q969E3 161 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 TLNRD1Q9H1K6 362 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 KCNK15Q9H427 330 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 MRPL16Q9NX20 251 aaKnown RBP8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 PRODH2Q9UF12 536 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 TRAV8-7A0A075B6U6 113 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 ANKRD28O15084 1053 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 PRH1P02810 166 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 EDN1P05305 212 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 CELP19835 753 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 CPOXP36551 454 aa8.02□□□□□ -1.13
CTDSPL-201ENST00000273179 POLR2IP36954 125 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms