RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CLEC4AQ9UMR7 237 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 PROCRQ9UNN8 238 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 R4GMQ9 66 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 CGAP01215 116 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 KIR3DL2P43630 455 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 Q499Y3 187 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 WDR38Q5JTN6 314 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 OR7E24Q6IFN5 339 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 CORO6Q6QEF8 472 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 CATSPERDQ86XM0 798 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 OR2AJ1Q8NGZ0 328 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 SLAMF6Q96DU3 332 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 ULBP2Q9BZM5 246 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 NELFAQ9H3P2 528 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 EMC7Q9NPA0 242 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 GDF2Q9UK05 429 aaPredicted RBP21.51■■□□□ 1.03
SSBP4-201ENST00000270061 A6NNC1 897 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 J3QRK9 145 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 SS18L1O75177 396 aaPredicted RBP21.5■■□□□ 1.03
SSBP4-201ENST00000270061 PNPP00491 289 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 MSR1P21757 451 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 MAPK3P27361 379 aaPredicted RBP21.5■■□□□ 1.03
SSBP4-201ENST00000270061 CD40LGP29965 261 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 ZNF84P51523 738 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 CAV3P56539 151 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 ZNF474Q6S9Z5 364 aaPredicted RBP21.5■■□□□ 1.03
SSBP4-201ENST00000270061 SPATC1Q76KD6 591 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 ZNF676Q8N7Q3 588 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 ABHD3Q8WU67 409 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 THRSPQ92748 146 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 CELSR1Q9NYQ6 3014 aa21.5■■□□□ 1.03
SSBP4-201ENST00000270061 H2BFMP0C1H6 154 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 PPP5CP53041 499 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 FAM27E3Q08E93 113 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 DAZAP2Q15038 168 aaPredicted RBP21.49■■□□□ 1.03
SSBP4-201ENST00000270061 HSD17B12Q53GQ0 312 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 CDH24Q86UP0 819 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.49■■□□□ 1.03
SSBP4-201ENST00000270061 IL17RDQ8NFM7 739 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 OR6K3Q8NGY3 331 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 NABP1Q96AH0 204 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 DERL3Q96Q80 235 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 ZCCHC4Q9H5U6 513 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 CMAHPQ9Y471 501 aa21.49■■□□□ 1.03
SSBP4-201ENST00000270061 PIN1P1O15428 100 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 TNFSF8P32971 234 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 MMP16P51512 607 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 NR2C2APQ86WQ0 139 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 ZNF610Q8N9Z0 462 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 OR10S1Q8NGN2 331 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 GPR148Q8TDV2 347 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 ACOT12Q8WYK0 555 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 ZNF775Q96BV0 537 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-201ENST00000270061 ATF6BQ99941 703 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 CLEC4MQ9H2X3 399 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-201ENST00000270061 NOX4Q9NPH5 578 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 B3GAT2Q9NPZ5 323 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 ELOVL5Q9NYP7 299 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 NDRG3Q9UGV2 375 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 POLR1DQ9Y2S0 133 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 SMIM30A4D0T7 59 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 FAM221AA4D161 298 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 NCR1O76036 304 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 RAF1P04049 648 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 MRPS34P82930 218 aaKnown RBP21.48■■□□□ 1.03
SSBP4-201ENST00000270061 C16orf87Q6PH81 154 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 CFAP77Q6ZQR2 320 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 KCTD12Q96CX2 325 aaKnown RBP21.48■■□□□ 1.03
SSBP4-201ENST00000270061 CEP19Q96LK0 163 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 NIPAL2Q9H841 368 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 PLSCR4Q9NRQ2 329 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 CENPMQ9NSP4 180 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 EMC3Q9P0I2 261 aa21.48■■□□□ 1.03
SSBP4-201ENST00000270061 A0A0G2JK05 382 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 ZNF724A8MTY0 619 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 ZNF878C9JN71 531 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 SRMP19623 302 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 RAB3BP20337 219 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 MFGE8Q08431 387 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-201ENST00000270061 RNPS1Q15287 305 aaKnown RBP21.47■■□□□ 1.03
SSBP4-201ENST00000270061 SGCAQ16586 387 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 SPANXN2Q5MJ10 180 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 ZNF416Q9BWM5 594 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 BCO1Q9HAY6 547 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 G6PC2Q9NQR9 355 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 ASH2LQ9UBL3 628 aa21.47■■□□□ 1.03
SSBP4-201ENST00000270061 RGS5O15539 181 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 OCM2P0CE71 109 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 NPR2P20594 1047 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 DDI2Q5TDH0 399 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 MZT2AQ6P582 158 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 LURAP1LQ8IV03 231 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 GPR137CQ8N3F9 429 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 SLC30A2Q9BRI3 323 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 PARPBPQ9NWS1 579 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 FBXL3Q9UKT7 428 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 TRBV5-7A0A0A0MS05 114 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 A0A1W2PPK0 400 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 LOC110117498-PIK3R3F6TDL0 507 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 AGTR1P30556 359 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms