RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PCDHB10Q9UN67 800 aa13.55□□□□□ -0.24
USE1-201ENST00000263897 DNHD1Q96M86 4753 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 A0A0G2JMP0 313 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 A0A0X1KG70 313 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 A0A1B0GWJ7 208 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 TMEM178BH3BS89 294 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 IFNL4K9M1U5 179 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 M0R135 149 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 ZNF593O00488 134 aaPredicted RBP13.54□□□□□ -0.24
USE1-201ENST00000263897 GYG2O15488 501 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 MLNRO43193 412 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 TCF21O43680 179 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 GYPBP06028 91 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 HOXB6P17509 224 aaKnown RBP13.54□□□□□ -0.24
USE1-201ENST00000263897 SPI1P17947 270 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 OTX1P32242 354 aaPredicted RBP13.54□□□□□ -0.24
USE1-201ENST00000263897 SRP9P49458 86 aaKnown RBP13.54□□□□□ -0.24
USE1-201ENST00000263897 TMEM155Q4W5P6 130 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 TEX30Q5JUR7 227 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 SHQ1Q6PI26 577 aaKnown RBP13.54□□□□□ -0.24
USE1-201ENST00000263897 ZNF771Q7L3S4 317 aaPredicted RBP13.54□□□□□ -0.24
USE1-201ENST00000263897 DCXRQ7Z4W1 244 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 TEX29Q8N6K0 151 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 BHLHE23Q8NDY6 225 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 OR4M2Q8NGB6 313 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 OR10AD1Q8NGE0 317 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 ST7LQ8TDW4 575 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 SPTSSAQ969W0 71 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 SLCO4A1Q96BD0 722 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 ZNF799Q96GE5 643 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 MEGF10Q96KG7 1140 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 TMPRSS13Q9BYE2 586 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 PATZ1Q9HBE1 687 aaKnown RBP13.54□□□□□ -0.24
USE1-201ENST00000263897 DDX28Q9NUL7 540 aaKnown RBP13.54□□□□□ -0.24
USE1-201ENST00000263897 COMMD3-BMI1R4GMX3 469 aa13.54□□□□□ -0.24
USE1-201ENST00000263897 DHRS12A0PJE2 317 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 ARRDC5A6NEK1 342 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 RIIAD1A6NNX1 92 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 F5H5P2 479 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 J3QLI3 93 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 GNGT2O14610 69 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 IFNGP01579 166 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 CLUP10909 449 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 PSKH1P11801 424 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 GATA3P23771 443 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 ZFP36P26651 326 aaKnown RBP13.53□□□□□ -0.24
USE1-201ENST00000263897 ENTPD1P49961 510 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 BLVRAP53004 296 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 BTG1P62324 171 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 LCN2P80188 198 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 ZMYND11Q15326 602 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 DCAF12L2Q5VW00 463 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 PGAP1Q75T13 922 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 TMEM179BQ7Z7N9 219 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 KLHL36Q8N4N3 616 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 SPICQ8N5J4 248 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 SLC7A6OSQ96CW6 309 aaPredicted RBP13.53□□□□□ -0.24
USE1-201ENST00000263897 C19orf24Q9BVV8 132 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 OCEL1Q9H607 264 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 CMC2Q9NRP2 79 aa13.53□□□□□ -0.24
USE1-201ENST00000263897 DOCK11Q5JSL3 2073 aa13.52□□□□□ -0.24
USE1-201ENST00000263897 PPIAL4EA0A075B759 164 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 LOC105371242A0A075B767 164 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 PPIAL4CA0A0B4J2A2 164 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 PPIAL4DF5H284 164 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 FOXH1O75593 365 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 HLA-DPB1P04440 258 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 SPARCP09486 303 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 PPIAL4FP0DN26 164 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 GRK5P34947 590 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 MDH2P40926 338 aaKnown RBP13.52□□□□□ -0.25
USE1-201ENST00000263897 SLC6A9P48067 706 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 MMP16P51512 607 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 PRSS12P56730 875 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 SCGB2A2Q13296 93 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 DNAL1Q4LDG9 190 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 LINC01590Q5TEZ4 76 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 DRAM2Q6UX65 266 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 ZNF420Q8TAQ5 688 aaPredicted RBP13.52□□□□□ -0.25
USE1-201ENST00000263897 TEX47Q8TBZ9 253 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 CENPMQ9NSP4 180 aa13.52□□□□□ -0.25
USE1-201ENST00000263897 PDP1Q9P0J1 537 aaPredicted RBP13.52□□□□□ -0.25
USE1-201ENST00000263897 A0A0A6YYJ9 748 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 H3BN98 237 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 ZNF3P17036 446 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 PRKXP51817 358 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 ZNF92Q03936 586 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 MAB21L1Q13394 359 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 TAF13Q15543 124 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 ZNF181Q2M3W8 571 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 SNAI3Q3KNW1 292 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 MRPL21Q7Z2W9 205 aaKnown RBP13.51□□□□□ -0.25
USE1-201ENST00000263897 MOGAT3Q86VF5 341 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 MUC20Q8N307 709 aaPredicted RBP13.51□□□□□ -0.25
USE1-201ENST00000263897 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 CELF2-AS1Q8N7Q2 184 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 OR6K6Q8NGW6 343 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 SPRYD4Q8WW59 207 aaPredicted RBP13.51□□□□□ -0.25
USE1-201ENST00000263897 SLAMF6Q96DU3 332 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 KCNJ15Q99712 375 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms