RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SGCEO43556 437 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 ZNF217O75362 1048 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 EIF3GO75821 320 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNX1-201ENST00000261889 AQP8O94778 261 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 RAB13P51153 203 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 RIDAP52758 137 aaKnown RBP11.6□□□□□ -0.55
SNX1-201ENST00000261889 SWI5Q1ZZU3 235 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 KRBOX4Q5JUW0 171 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 RPL7L1Q6DKI1 246 aaKnown RBP11.6□□□□□ -0.55
SNX1-201ENST00000261889 AWAT2Q6E213 333 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 OR2A2Q6IF42 318 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 ZNF615Q8N8J6 731 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 AKR1E2Q96JD6 320 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 MRGPRX1Q96LB2 322 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 LAT2Q9GZY6 243 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 TNFSF12O43508 249 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 KLK2P20151 261 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 GLRA1P23415 457 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 ACOT7LQ6ZUV0 252 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 ZNF775Q96BV0 537 aaPredicted RBP11.59□□□□□ -0.55
SNX1-201ENST00000261889 OR10C1Q96KK4 312 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 TAS2R8Q9NYW2 309 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 AMDHD2Q9Y303 409 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 SNRNP70P08621 437 aaKnown RBP11.59□□□□□ -0.55
SNX1-201ENST00000261889 PTGFRP43088 359 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 POU3F1Q03052 451 aaPredicted RBP11.59□□□□□ -0.55
SNX1-201ENST00000261889 ZNF141Q15928 474 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 SLC18B1Q6NT16 456 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.59□□□□□ -0.55
SNX1-201ENST00000261889 ZNF679Q8IYX0 411 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 NAA11Q9BSU3 229 aaPredicted RBP11.59□□□□□ -0.55
SNX1-201ENST00000261889 G6PC3Q9BUM1 346 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 PRMT8Q9NR22 394 aaPredicted RBP11.59□□□□□ -0.55
SNX1-201ENST00000261889 ZNF581Q9P0T4 197 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 CYP8B1Q9UNU6 501 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 hCG_1809904A0A1W2PP81 198 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 A0A1W2PR64 198 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 A0A1W2PRV1 198 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 PRSS37A4D1T9 235 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 A6NCN8 305 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 MED6O75586 246 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 ARG1P05089 322 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 NTSR1P30989 418 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 RAB32Q13637 225 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 PDCD1Q15116 288 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 PRTGQ2VWP7 1150 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 LANCL3Q6ZV70 420 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 ADGRE4PQ86SQ3 457 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 ANGPTL5Q86XS5 388 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 OR51E1Q8TCB6 317 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 TPSD1Q9BZJ3 242 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 TBL1XR1Q9BZK7 514 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 SCPEP1Q9HB40 452 aa11.59□□□□□ -0.55
SNX1-201ENST00000261889 GDF2Q9UK05 429 aaPredicted RBP11.59□□□□□ -0.55
SNX1-201ENST00000261889 TCRBV21S2A2A0A5A6 115 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 MEX3AA1L020 520 aaKnown RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 EFCAB7A8K855 629 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 RAB27BO00194 218 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 AK1P00568 194 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 ZBTB25P24278 435 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 FLI1Q01543 452 aaPredicted RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 RASGEF1BQ0VAM2 473 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 ZNF704Q6ZNC4 412 aaPredicted RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 LYG2Q86SG7 212 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 SVBPQ8N300 66 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 PAQR4Q8N4S7 273 aaPredicted RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 EID2Q8N6I1 236 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 APCDD1LQ8NCL9 501 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 SLC25A43Q8WUT9 341 aaPredicted RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 SECTM1Q8WVN6 248 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 UTP23Q9BRU9 249 aaKnown RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 RPH3AQ9Y2J0 694 aaPredicted RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 POLR1DQ9Y2S0 133 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 AHCTF1Q8WYP5 2266 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 FAM221AA4D161 298 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 TUBAL3A6NHL2 446 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 CLDN4O14493 209 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 NME2P1O60361 137 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 LPAR6P43657 344 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 OR3A4PP47883 348 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 F2RL1P55085 397 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 SGCAQ16586 387 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 REEP6Q96HR9 211 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 JSRP1Q96MG2 331 aaPredicted RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 PHB2Q99623 299 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 CDX2Q99626 313 aaPredicted RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 LMF2Q9BU23 707 aaKnown RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 UBQLN4Q9NRR5 601 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 IGHV5-51A0A0C4DH38 117 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 A0A0D9SG52 128 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 NXPH3O95157 252 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 JMJD7P0C870 316 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 RAB6AP20340 208 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 IL12BP29460 328 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 CAPZA2P47755 286 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 NOVA1P51513 510 aaKnown RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 MFAP5Q13361 173 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 SP6Q3SY56 376 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms