RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 MAP2K4P45985 399 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 NAAAQ02083 359 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF85Q03923 595 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 SCRN3Q0VDG4 424 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 ECH1Q13011 328 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 EIF2B1Q14232 305 aaKnown RBP10.01□□□□□ -0.81
PFDN1-201ENST00000261813 RAB39AQ14964 217 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 CCDC58Q4VC31 144 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 TMEM53Q6P2H8 277 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 KRT77Q7Z794 578 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.01□□□□□ -0.81
PFDN1-201ENST00000261813 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.01□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF679Q8IYX0 411 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 NRGNQ92686 78 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 TBX5Q99593 518 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF649Q9BS31 505 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 ABHD6Q9BV23 337 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 RNF121Q9H920 327 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 CLEC2DQ9UHP7 191 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 TIMM10BQ9Y5J6 103 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 DCHS2Q6V1P9 2916 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 ATP6V1G2-DDX39BF2Z307 99 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 J3QLW9 94 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 SERPINA5P05154 406 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 HSMCR30P0CW71 290 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF19P17023 458 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 CD53P19397 219 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 GRB2P62993 217 aaKnown RBP10.01□□□□□ -0.81
PFDN1-201ENST00000261813 PSG4Q00888 419 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 TAF13Q15543 124 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 TIMM50Q3ZCQ8 353 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 PABPC1L2AQ5JQF8 200 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 DCXRQ7Z4W1 244 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 CPEB3Q8NE35 698 aaKnown RBP10.01□□□□□ -0.81
PFDN1-201ENST00000261813 AKR7LQ8NHP1 331 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 SPRYD4Q8WW59 207 aaPredicted RBP10.01□□□□□ -0.81
PFDN1-201ENST00000261813 GATAD2BQ8WXI9 593 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 AKAP1Q92667 903 aaKnown RBP eCLIP10.01□□□□□ -0.812e-6■■■□□ 17
PFDN1-201ENST00000261813 OR8B4Q96RC9 309 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 OR2H1Q9GZK4 316 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 FAM192AQ9GZU8 254 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 WNT5BQ9H1J7 359 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 LIME1Q9H400 295 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 IKZF2Q9UKS7 526 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 FBXL3Q9UKT7 428 aa10.01□□□□□ -0.81
PFDN1-201ENST00000261813 LSM2Q9Y333 95 aaKnown RBP10.01□□□□□ -0.81
PFDN1-201ENST00000261813 IGHV2OR16-5A0A0B4J2B6 119 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF878C9JN71 531 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 CCRL2O00421 344 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 NOL3O60936 208 aaKnown RBP10□□□□□ -0.81
PFDN1-201ENST00000261813 INMTO95050 263 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 LCKP06239 509 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 H2BFMP0C1H6 154 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 PSKH1P11801 424 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 PSMA1P25786 263 aaKnown RBP10□□□□□ -0.81
PFDN1-201ENST00000261813 TGM4P49221 684 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 RIDAP52758 137 aaKnown RBP10□□□□□ -0.81
PFDN1-201ENST00000261813 HCCSP53701 268 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 TPBGQ13641 420 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 TRAM1Q15629 374 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF672Q499Z4 452 aaPredicted RBP10□□□□□ -0.81
PFDN1-201ENST00000261813 ARMCX4Q5H9R4 360 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF684Q5T5D7 378 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 OR2G6Q5TZ20 316 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 RPL22L1Q6P5R6 122 aaKnown RBP10□□□□□ -0.81
PFDN1-201ENST00000261813 SLC22A25Q6T423 547 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 YIPF7Q8N8F6 280 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF485Q8NCK3 441 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 OR13F1Q8NGS4 319 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 ST7LQ8TDW4 575 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 RNF133Q8WVZ7 376 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 UFD1Q92890 307 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 RADILQ96JH8 1075 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 C4orf36Q96KX1 117 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 HDHD2Q9H0R4 259 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 SP140LQ9H930 580 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 UBTD1Q9HAC8 227 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 ASH2LQ9UBL3 628 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 ATPIF1Q9UII2 106 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 GNG8Q9UK08 70 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 COPS3Q9UNS2 423 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 LHFPL6Q9Y693 200 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 F8P00451 2351 aa10□□□□□ -0.81
PFDN1-201ENST00000261813 PDZD2O15018 2839 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 IQCMA0A1B0GVH7 501 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 ACOD1A6NK06 481 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 E7EQL1 145 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 HS3ST1O14792 307 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 CRYAAP02489 173 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 CD1AP06126 327 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 CCL2P13500 99 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF35P13682 527 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 CPEP16870 476 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 APEX1P27695 318 aaKnown RBP9.99□□□□□ -0.81
PFDN1-201ENST00000261813 RPS27P42677 84 aaKnown RBP9.99□□□□□ -0.81
PFDN1-201ENST00000261813 RGS6P49758 472 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 OR12D2P58182 307 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 HIST1H3AP68431 136 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 HGFACQ04756 655 aa9.99□□□□□ -0.81
PFDN1-201ENST00000261813 ZNF829Q3KNS6 432 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms