RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ZNF813Q6ZN06 617 aa16.87■□□□□ 0.29
COL4A3BP-201ENST00000261415 MBOAT2Q6ZWT7 520 aa16.87■□□□□ 0.29
COL4A3BP-201ENST00000261415 TEX19Q8NA77 164 aa16.87■□□□□ 0.29
COL4A3BP-201ENST00000261415 SNIP1Q8TAD8 396 aaKnown RBP16.87■□□□□ 0.29
COL4A3BP-201ENST00000261415 TMEM239Q8WW34 195 aa16.87■□□□□ 0.29
COL4A3BP-201ENST00000261415 CCNL2Q96S94 520 aaPredicted RBP16.87■□□□□ 0.29
COL4A3BP-201ENST00000261415 ASF1BQ9NVP2 202 aa16.87■□□□□ 0.29
COL4A3BP-201ENST00000261415 CNIH4Q9P003 139 aa16.87■□□□□ 0.29
COL4A3BP-201ENST00000261415 IGLV3-32A0A0A0MS00 114 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 GOSR2O14653 212 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 EFSO43281 561 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 BCL2L11O43521 198 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 SLC25A12O75746 678 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 NDUFB7P17568 137 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 AKR1C2P52895 323 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 SUMO3P55854 103 aaPredicted RBP16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 OC90Q02509 493 aaPredicted RBP16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 AKR1C1Q04828 323 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 INPP5JQ15735 1006 aaPredicted RBP16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 LINC00303Q3SY05 128 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 NKAPLQ5M9Q1 402 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 C1orf94Q6P1W5 598 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 LINC00114Q6XXX2 140 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 LINGO2Q7L985 606 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 ZNF227Q86WZ6 799 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 NRMQ8IXM6 262 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 GPR119Q8TDV5 335 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 ZNF426Q9BUY5 554 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 ANGPTL4Q9BY76 406 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 PROK2Q9HC23 129 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 ABI3Q9P2A4 366 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 ANKUB1A6NFN9 424 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 AP4M1O00189 453 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 PIP5K1CO60331 668 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 F10P00742 488 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 OR8U8P0C7N1 319 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 ATP6V1E1P36543 226 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 LUMP51884 338 aaPredicted RBP16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 LINC00696Q6ZRV3 163 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 BOLLQ8N9W6 283 aaKnown RBP16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 OR10H5Q8NGA6 315 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 DPH1Q9BZG8 443 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 TRIM36Q9NQ86 728 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 GFOD1Q9NXC2 390 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 DMXL2Q8TDJ6 3036 aa16.86■□□□□ 0.29
COL4A3BP-201ENST00000261415 ANKRD20A5PA0PJZ0 165 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 METTL21EPA6NDL7 271 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 NFYBP25208 207 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 MRPS10P82664 201 aaKnown RBP16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 UBE2NLQ5JXB2 153 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 CEACAM19Q7Z692 300 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 TMEM200AQ86VY9 491 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 ARRDC1Q8N5I2 433 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 PIGXQ8TBF5 258 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 FCAMRQ8WWV6 532 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 NTNG2Q96CW9 530 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 FAM122AQ96E09 287 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 TEX12Q9BXU0 123 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 TMEM185BQ9H7F4 350 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 TREM1Q9NP99 234 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 UQCC1Q9NVA1 299 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 LRFN1Q9P244 771 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 A0A087WUJ7 227 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 FGF16O43320 207 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 CDC40O60508 579 aaKnown RBP eCLIP16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 MSX1P28360 303 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 IFNGR2P38484 337 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 CASRP41180 1078 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 RBM34P42696 430 aaKnown RBP16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 OMPP47874 163 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 MTFR2Q6P444 385 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 PXKQ7Z7A4 578 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 ATG4DQ86TL0 474 aaPredicted RBP16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 MEX3DQ86XN8 651 aaKnown RBP16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 PFN4Q8NHR9 129 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 WNT2BQ93097 391 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 HS6ST2Q96MM7 605 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 C2orf88Q9BSF0 95 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 ADAM19Q9H013 955 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 TAS2R10Q9NYW0 307 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 GPR52Q9Y2T5 361 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 LAMA5O15230 3695 aa16.85■□□□□ 0.29
COL4A3BP-201ENST00000261415 G3V3Y1 287 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 GP1BBP13224 206 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 TACR3P29371 465 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 ID4P47928 161 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 C11orf88Q6PI97 169 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 SLC36A1Q7Z2H8 476 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 HIST1H2BAQ96A08 127 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 RAB3CQ96E17 227 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 FAM46AQ96IP4 442 aaKnown RBP16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 GPA33Q99795 319 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 MED31Q9Y3C7 131 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 TNRC6AQ8NDV7 1962 aaKnown RBP16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 TRAV1-2A0A0B4J238 106 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 ANKRD61A6NGH8 418 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 ELOA3DA6NLF2 546 aaPredicted RBP16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 P04436 131 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 PNMTP11086 282 aa16.84■□□□□ 0.29
COL4A3BP-201ENST00000261415 APEHP13798 732 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms