RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ZNF79Q15937 498 aa14.53□□□□□ -0.08
SDCBP-201ENST00000260130 GLB1L2Q8IW92 636 aa14.53□□□□□ -0.08
SDCBP-201ENST00000260130 OR52I1Q8NGK6 324 aa14.53□□□□□ -0.08
SDCBP-201ENST00000260130 MBD6Q96DN6 1003 aa14.53□□□□□ -0.08
SDCBP-201ENST00000260130 TSSK2Q96PF2 358 aa14.53□□□□□ -0.08
SDCBP-201ENST00000260130 CCL19Q99731 98 aa14.53□□□□□ -0.08
SDCBP-201ENST00000260130 SRA1Q9HD15 236 aaKnown RBP14.53□□□□□ -0.08
SDCBP-201ENST00000260130 COA3Q9Y2R0 106 aaPredicted RBP14.53□□□□□ -0.08
SDCBP-201ENST00000260130 PRKYO43930 277 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 CST2P09228 141 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 MMP7P09237 267 aaPredicted RBP14.52□□□□□ -0.08
SDCBP-201ENST00000260130 IL7P13232 177 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 CALCRP30988 508 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 ATAD3CQ5T2N8 411 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 DNM1P34Q6PK57 102 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 B3GLCTQ6Y288 498 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 NPEPL1Q8NDH3 523 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 SDR9C7Q8NEX9 313 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 OR4Q3Q8NH05 313 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 TEX47Q8TBZ9 253 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 FBXO17Q96EF6 278 aa14.52□□□□□ -0.08
SDCBP-201ENST00000260130 TRMT61AQ96FX7 289 aaKnown RBP14.52□□□□□ -0.08
SDCBP-201ENST00000260130 TXNL4BQ9NX01 149 aaKnown RBP14.52□□□□□ -0.08
SDCBP-201ENST00000260130 IGHV2OR16-5A0A0B4J2B6 119 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 OR6C68A6NDL8 312 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 DANCRP0C864 163 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 TRAPPC2P0DI81 140 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 TRAPPC2BP0DI82 140 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 RCVRNP35243 200 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 DDOSTP39656 456 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 GINS1Q14691 196 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 PGGHGQ32M88 737 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 FAM131AQ6UXB0 335 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 ZNF584Q8IVC4 421 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 OR6V1Q8N148 313 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 IQCF1Q8N6M8 205 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 ZNF582Q96NG8 517 aaPredicted RBP14.51□□□□□ -0.09
SDCBP-201ENST00000260130 FOXN4Q96NZ1 517 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 DHRS9Q9BPW9 319 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 SLC22A4Q9H015 551 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 RPRD1BQ9NQG5 326 aaKnown RBP14.51□□□□□ -0.09
SDCBP-201ENST00000260130 B9D1Q9UPM9 204 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 LAMP3Q9UQV4 416 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 DCTN6O00399 190 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 ZNF32P17041 273 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 RFX2P48378 723 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 WNT4P56705 351 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 CDK5Q00535 292 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 PLP2Q04941 152 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 BAK1Q16611 211 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 DEFB113Q30KQ7 82 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 BCDIN3DQ7Z5W3 292 aaKnown RBP14.51□□□□□ -0.09
SDCBP-201ENST00000260130 GDPD1Q8N9F7 314 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 OR4F15Q8NGB8 312 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 IGFBPL1Q8WX77 278 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 KCTD7Q96MP8 289 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 NEDD4LQ96PU5 975 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 DDOQ99489 341 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 ZNF416Q9BWM5 594 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 TPK1Q9H3S4 243 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 ISYNA1Q9NPH2 558 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 DDX28Q9NUL7 540 aaKnown RBP14.51□□□□□ -0.09
SDCBP-201ENST00000260130 N6AMT1Q9Y5N5 214 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 CCDC168Q8NDH2 2452 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 OTOGQ6ZRI0 2925 aa14.51□□□□□ -0.09
SDCBP-201ENST00000260130 A0A1W2PQ09 198 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 C12orf71A8MTZ7 269 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 SOD3P08294 240 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 ZNF35P13682 527 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 PCBD1P61457 104 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 MXD1Q05195 221 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 HNRNPA0Q13151 305 aaKnown RBP14.5□□□□□ -0.09
SDCBP-201ENST00000260130 ASAH1Q13510 395 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 ENDOGQ14249 297 aaKnown RBP14.5□□□□□ -0.09
SDCBP-201ENST00000260130 ZFP69Q49AA0 526 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 ZMAT1Q5H9K5 638 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 DDI2Q5TDH0 399 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 NXNL2Q5VZ03 156 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 SYT9Q86SS6 491 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 TMEM171Q8WVE6 324 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 AP3S1Q92572 193 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 C1orf198Q9H425 327 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 EMC7Q9NPA0 242 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 MRPS18AQ9NVS2 196 aaKnown RBP14.5□□□□□ -0.09
SDCBP-201ENST00000260130 BEX4Q9NWD9 120 aaPredicted RBP14.5□□□□□ -0.09
SDCBP-201ENST00000260130 TIMM10BQ9Y5J6 103 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 FKBP7Q9Y680 259 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 RAI1Q7Z5J4 1906 aaPredicted RBP14.5□□□□□ -0.09
SDCBP-201ENST00000260130 IGLV1-36A0A0B4J1U3 117 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 TMEM129A0AVI4 362 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 MPZL1O95297 269 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 AZGP1P25311 298 aaKnown RBP14.5□□□□□ -0.09
SDCBP-201ENST00000260130 CENPAP49450 140 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 ETV1P50549 477 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 FABP6P51161 128 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 HSF2Q03933 536 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 HGFACQ04756 655 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 RAB40BQ12829 278 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 SNAPC1Q16533 368 aa14.5□□□□□ -0.09
SDCBP-201ENST00000260130 PABPC1L2AQ5JQF8 200 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms