RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 CMAHPQ9Y471 501 aa15.27■□□□□ 0.04
SRSF1-201ENST00000258962 KLF2Q9Y5W3 355 aaPredicted RBP15.27■□□□□ 0.04
SRSF1-201ENST00000258962 ISPDA4D126 451 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 IL2RAP01589 272 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 TTRP02766 147 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 CST2P09228 141 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 SRMP19623 302 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 RAB3BP20337 219 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 MAPK3P27361 379 aaPredicted RBP15.27■□□□□ 0.03
SRSF1-201ENST00000258962 AGTR1P30556 359 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 TNFSF8P32971 234 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 THBS2P35442 1172 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF181Q2M3W8 571 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 SLC25A35Q3KQZ1 300 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 BCL2L15Q5TBC7 163 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 NSUN5P2Q63ZY6 315 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 SFXN4Q6P4A7 337 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 GFI1Q99684 422 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 NIPAL2Q9H841 368 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 GP6Q9HCN6 339 aa15.27■□□□□ 0.03
SRSF1-201ENST00000258962 OR6C65A6NJZ3 312 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 PRSS44E7EML9 344 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 RPL36A-HNRNPH2H7BZ11 118 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 TMEM127O75204 238 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 KRT33AO76009 404 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 ISG15P05161 165 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 FCGR2AP12318 317 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 ACHEP22303 614 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 ANOS1P23352 680 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 CTSSP25774 331 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 HSD11B1P28845 292 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 PRKXP51817 358 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 GRB2P62993 217 aaKnown RBP15.26■□□□□ 0.03
SRSF1-201ENST00000258962 PPP3R1P63098 170 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 TAF13Q15543 124 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 STK11Q15831 433 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 SLC22A24Q8N4F4 322 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 LILRB4Q8NHJ6 448 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 TSEN15Q8WW01 171 aaKnown RBP15.26■□□□□ 0.03
SRSF1-201ENST00000258962 APH1AQ96BI3 265 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 KCTD12Q96CX2 325 aaKnown RBP15.26■□□□□ 0.03
SRSF1-201ENST00000258962 PBOV1Q9GZY1 135 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 ZCCHC4Q9H5U6 513 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 ABCB9Q9NP78 766 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 BRD7Q9NPI1 651 aa15.26■□□□□ 0.03
SRSF1-201ENST00000258962 A0A0G2JNJ9 132 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 LOC107986453A0A1B0GWG9 222 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 TIMP3P35625 211 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 CX3CR1P49238 355 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 FOXG1P55316 489 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-201ENST00000258962 RSPO1Q2MKA7 263 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-201ENST00000258962 ELFN2Q5R3F8 820 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 IDNKQ5T6J7 187 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 ELMOD2Q8IZ81 293 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 TMEM106AQ96A25 262 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 DOCK7Q96N67 2140 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 KCNJ15Q99712 375 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 CCDC32Q9BV29 185 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 Q9UFV3 132 aa15.25■□□□□ 0.03
SRSF1-201ENST00000258962 NUFIP1Q9UHK0 495 aaKnown RBP15.25■□□□□ 0.03
SRSF1-201ENST00000258962 AK6Q9Y3D8 172 aaKnown RBP15.25■□□□□ 0.03
SRSF1-201ENST00000258962 TRAV8-7A0A075B6U6 113 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 ANKRD61A6NGH8 418 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 NOTOA8MTQ0 251 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 P2RY10O00398 339 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 SS18L1O75177 396 aaPredicted RBP15.24■□□□□ 0.03
SRSF1-201ENST00000258962 RAF1P04049 648 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 ACSM4P0C7M7 580 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 UBCP0CG48 685 aaKnown RBP15.24■□□□□ 0.03
SRSF1-201ENST00000258962 SLC2A2P11168 524 aaPredicted RBP15.24■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF121P58317 390 aaPredicted RBP15.24■□□□□ 0.03
SRSF1-201ENST00000258962 ARF1P84077 181 aaKnown RBP15.24■□□□□ 0.03
SRSF1-201ENST00000258962 ASPHD2Q6ICH7 369 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 STAC2Q6ZMT1 411 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF704Q6ZNC4 412 aaPredicted RBP15.24■□□□□ 0.03
SRSF1-201ENST00000258962 PRSS45Q7RTY3 260 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 P4HA3Q7Z4N8 544 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 LRRTM1Q86UE6 522 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 SKA3Q8IX90 412 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 PARP16Q8N5Y8 322 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 FGFBP3Q8TAT2 258 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 MOB1AQ9H8S9 216 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 KCNJ16Q9NPI9 418 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 COMMD3Q9UBI1 195 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 PRSS50Q9UI38 385 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 DAPK2Q9UIK4 370 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 HHLA2Q9UM44 414 aa15.24■□□□□ 0.03
SRSF1-201ENST00000258962 ASH1LQ9NR48 2969 aaKnown RBP15.24■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF587BE7ETH6 402 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 PDCD5O14737 125 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 SLC2A1P11166 492 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 EPXP11678 715 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF32P17041 273 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 ADRA2CP18825 462 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 ATF1P18846 271 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 PTBP1P26599 531 aaKnown RBP eCLIP15.23■□□□□ 0.03
SRSF1-201ENST00000258962 OTX1P32242 354 aaPredicted RBP15.23■□□□□ 0.03
SRSF1-201ENST00000258962 RAB35Q15286 201 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 GUSBP1Q15486 140 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 CDSNQ15517 529 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms