RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CHRM4P08173 479 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 CXCL1P09341 107 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF19P17023 458 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 BPIP17213 487 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 CD58P19256 250 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 MMP11P24347 488 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 MIPP30301 263 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 CCKARP32238 428 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 PIGPP57054 158 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SRSF4Q08170 494 aaKnown RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 AIMP2Q13155 320 aaKnown RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF345Q14585 488 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 MST1LQ2TV78 715 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 PPM1JQ5JR12 505 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SLC8B1Q6J4K2 584 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 FAM71F2Q6NXP2 309 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF549Q6P9A3 640 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 LCTLQ6UWM7 567 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 GLDNQ6ZMI3 551 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SIAH3Q8IW03 269 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 OR52P1PQ8NH57 321 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM18Q96B42 140 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SEH1LQ96EE3 360 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 FAM46AQ96IP4 442 aaKnown RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 TCEAL2Q9H3H9 227 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 TRIM36Q9NQ86 728 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 OXSMQ9NWU1 459 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 NDUFB11Q9NX14 153 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 THAP10Q9P2Z0 257 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 IKZF2Q9UKS7 526 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 HHLA2Q9UM44 414 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 LOC285095A0A1B0GVY8 99 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 IGSF23A1L1A6 192 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF705FA8MVS1 300 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 MINDY4BA8MYZ0 360 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 DUSP11O75319 330 aaKnown RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 EDN1P05305 212 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF705DP0CH99 300 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF705BP0CI00 300 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 MTNR1BP49286 362 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 TAF6P49848 677 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 DAPP51397 102 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 H2BFSP57053 126 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 RPS13P62277 151 aaKnown RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 OC90Q02509 493 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ANKRD55Q3KP44 614 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 C4orf17Q53FE4 359 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 GRHL2Q6ISB3 625 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 LILRA6Q6PI73 481 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 DOK6Q6PKX4 331 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 COX15Q7KZN9 410 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 MON1BQ7L1V2 547 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ANKRD31Q8N7Z5 1873 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 NECAP1Q8NC96 275 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 PLPP5Q8NEB5 264 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 TTC16Q8NEE8 873 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 OR4K2Q8NGD2 314 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 NETO1Q8TDF5 533 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 Q8WTZ3 238 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SECTM1Q8WVN6 248 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF582Q96NG8 517 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 TBX15Q96SF7 602 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 GABARAPL1Q9H0R8 117 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ACSS2Q9NR19 701 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 MRPL27Q9P0M9 148 aaKnown RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF319Q9P2F9 582 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 NXT1Q9UKK6 140 aaKnown RBP6.94□□□□□ -1.3
GPNMB-201ENST00000258733 CBLCQ9ULV8 474 aa6.94□□□□□ -1.3
GPNMB-201ENST00000258733 SMIM35A0A1B0GVV1 85 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ARL5CA6NH57 179 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM233B4DJY2 109 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 KLF8O95600 359 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-201ENST00000258733 TBX6O95947 436 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-201ENST00000258733 SERPINA7P05543 415 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ADRA2AP08913 450 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 GPR6P46095 362 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ATP4BP51164 291 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ART1P52961 327 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 CAV3P56539 151 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 TMPRSS3P57727 454 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 LILRA4P59901 499 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 OR2F1Q13607 317 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 SCARF1Q14162 830 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF585BQ52M93 769 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF626Q68DY1 528 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF280BQ86YH2 543 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 DOLPP1Q86YN1 238 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 C5orf17Q8NAS9 161 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 LINC00116Q8NCU8 138 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 OR52E5Q8NH55 327 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 FAM174AQ8TBP5 190 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 APH1AQ96BI3 265 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 RAB39BQ96DA2 213 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 PERPQ96FX8 193 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 ZIC5Q96T25 663 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 GPR27Q9NS67 375 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM161AQ9NX61 479 aa6.93□□□□□ -1.3
GPNMB-201ENST00000258733 OR51B2Q9Y5P1 312 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms