RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 HIST2H3AQ71DI3 136 aa10.29□□□□□ -0.76
TROAP-201ENST00000257909 SHISA5Q8N114 240 aa10.29□□□□□ -0.76
TROAP-201ENST00000257909 FAM24BQ8N5W8 94 aa10.29□□□□□ -0.76
TROAP-201ENST00000257909 CMBLQ96DG6 245 aa10.29□□□□□ -0.76
TROAP-201ENST00000257909 TOX2Q96NM4 488 aa10.29□□□□□ -0.76
TROAP-201ENST00000257909 LRRC3BQ96PB8 259 aa10.29□□□□□ -0.76
TROAP-201ENST00000257909 WDR77Q9BQA1 342 aaPredicted RBP10.29□□□□□ -0.76
TROAP-201ENST00000257909 B9D1Q9UPM9 204 aa10.29□□□□□ -0.76
TROAP-201ENST00000257909 H0YGG7 62 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 ISG15P05161 165 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 HOXC4P09017 264 aaPredicted RBP10.28□□□□□ -0.76
TROAP-201ENST00000257909 HOXB5P09067 269 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 HOXA5P20719 270 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 RAB38P57729 211 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 ARF3P61204 181 aaPredicted RBP10.28□□□□□ -0.76
TROAP-201ENST00000257909 RELQ04864 619 aaPredicted RBP10.28□□□□□ -0.76
TROAP-201ENST00000257909 TGIF1Q15583 401 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 C9orf152Q5JTZ5 239 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 POC1AQ8NBT0 407 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 BHLHE23Q8NDY6 225 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 TMEM230Q96A57 120 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 C8orf44Q96CB5 159 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 C5orf66Q9H5L9 145 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 RHBDD3Q9Y3P4 386 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 LRP12Q9Y561 859 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 CHD7Q9P2D1 2997 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 TBC1D3DA0A087WVF3 549 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 TBC1D3LB9A6J9 549 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 BPNT1O95861 308 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 TBC1D3HP0C7X1 549 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 HKR1P10072 659 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 SNCAP37840 140 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 SULT1A1P50225 295 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 FAM3AP98173 230 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 IL15RAQ13261 267 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 SLC9A3R2Q15599 337 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 VAX1Q5SQQ9 334 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 NCMAPQ5T1S8 102 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 TBC1D3CQ6IPX1 549 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 TBC1D3Q8IZP1 549 aaPredicted RBP10.28□□□□□ -0.76
TROAP-201ENST00000257909 CSNK1A1LQ8N752 337 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 BCORP1Q8N888 145 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 OR9K2Q8NGE7 335 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 OR56B1Q8NGI3 324 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 OR51F2Q8NH61 342 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 ZDHHC12Q96GR4 267 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 SPACA7Q96KW9 195 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 CNTD2Q9H8S5 307 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 SPACA1Q9HBV2 294 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 FAM212BQ9NTI7 297 aaPredicted RBP10.28□□□□□ -0.76
TROAP-201ENST00000257909 R4GMQ9 66 aa10.28□□□□□ -0.76
TROAP-201ENST00000257909 A0A0C4DFX4 3053 aa10.27□□□□□ -0.76
TROAP-201ENST00000257909 LOC107986453A0A1B0GWG9 222 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 TIMP1P01033 207 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 GNB3P16520 340 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 SGCGQ13326 291 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 UNC119Q13432 240 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.27□□□□□ -0.77
TROAP-201ENST00000257909 NSUN5P2Q63ZY6 315 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 OPN5Q6U736 354 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 KTI12Q96EK9 354 aaPredicted RBP10.27□□□□□ -0.77
TROAP-201ENST00000257909 OR10C1Q96KK4 312 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 ASB16Q96NS5 453 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 ABHD6Q9BV23 337 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 S1PR5Q9H228 398 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 PPP4R1LQ9P1A2 415 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 TBC1D29Q9UFV1 150 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 PRSS37A4D1T9 235 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 POM121BA6NF01 834 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 ZNF264O43296 627 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 OIP5O43482 229 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 CT45A8P0DMV1 189 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 CT45A9P0DMV2 189 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 FPR2P25090 351 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 HSD11B1P28845 292 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 S100A2P29034 98 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 CDX1P47902 265 aaPredicted RBP10.27□□□□□ -0.77
TROAP-201ENST00000257909 ID4P47928 161 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 CCR4P51679 360 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 UCP2P55851 309 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 S100A10P60903 97 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 GUK1Q16774 197 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 CT45A2Q5DJT8 189 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 PLPP4Q5VZY2 271 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 SFTPA1Q8IWL2 248 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 ZNF565Q8N9K5 539 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 OR52N5Q8NH56 324 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 PHOSPHO2Q8TCD6 241 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 METTL21AQ8WXB1 218 aa10.27□□□□□ -0.77
TROAP-201ENST00000257909 MRPL22Q9NWU5 206 aaKnown RBP10.27□□□□□ -0.77
TROAP-201ENST00000257909 SRSF10O75494 262 aaKnown RBP10.26□□□□□ -0.77
TROAP-201ENST00000257909 IFNA2P01563 188 aa10.26□□□□□ -0.77
TROAP-201ENST00000257909 KLK3P07288 261 aaPredicted RBP10.26□□□□□ -0.77
TROAP-201ENST00000257909 RD3LP0DJH9 198 aa10.26□□□□□ -0.77
TROAP-201ENST00000257909 RPL12P30050 165 aaKnown RBP10.26□□□□□ -0.77
TROAP-201ENST00000257909 TCEA2Q15560 299 aa10.26□□□□□ -0.77
TROAP-201ENST00000257909 NNATQ16517 81 aa10.26□□□□□ -0.77
TROAP-201ENST00000257909 ANKRD55Q3KP44 614 aa10.26□□□□□ -0.77
TROAP-201ENST00000257909 GKN2Q86XP6 184 aa10.26□□□□□ -0.77
TROAP-201ENST00000257909 SLC22A24Q8N4F4 322 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms