RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SLC26A10Q8NG04 563 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
USHBP1-201ENST00000252597 C14orf79Q96F83 325 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 PRRT1Q99946 306 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 CHRDQ9H2X0 955 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 FANCFQ9NPI8 374 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 PIAS3Q9Y6X2 628 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 SIGLEC6O43699 453 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 CRYBA1P05813 215 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 TLE3Q04726 772 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 LYG2Q86SG7 212 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 PMM1Q92871 262 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 TNFSF18Q9UNG2 199 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 TEX13DA0A0J9YY54 714 aaPredicted RBP10.71□□□□□ -0.69
USHBP1-201ENST00000252597 EPOPA6NHQ4 379 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF354AO60765 605 aaPredicted RBP10.71□□□□□ -0.69
USHBP1-201ENST00000252597 LRP3O75074 770 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 DHPSP49366 369 aaPredicted RBP10.71□□□□□ -0.69
USHBP1-201ENST00000252597 OR2B8PP59922 312 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 INPP5JQ15735 1006 aaPredicted RBP10.71□□□□□ -0.69
USHBP1-201ENST00000252597 SGCAQ16586 387 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 PTCRAQ6ISU1 281 aaPredicted RBP10.71□□□□□ -0.69
USHBP1-201ENST00000252597 GLIPR1L1Q6UWM5 242 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 RTL10Q7L3V2 364 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 BAP18Q8IXM2 172 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF595Q8IYB9 648 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 KCNRGQ8N5I3 272 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 USB1Q9BQ65 265 aaKnown RBP10.71□□□□□ -0.69
USHBP1-201ENST00000252597 RSRP1Q9BUV0 290 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 PIGMQ9H3S5 423 aa10.71□□□□□ -0.69
USHBP1-201ENST00000252597 IGHV5-51A0A0C4DH38 117 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 OR2F2O95006 317 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 FXYD4P59646 89 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 CSNK2A1P68400 391 aaPredicted RBP10.71□□□□□ -0.7
USHBP1-201ENST00000252597 FLI1Q01543 452 aaPredicted RBP10.71□□□□□ -0.7
USHBP1-201ENST00000252597 SKP2Q13309 424 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 OR2F1Q13607 317 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 C1orf140Q5VVS0 124 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 CSNK2A3Q8NEV1 391 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 CMTM3Q96MX0 182 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 S100A13Q99584 98 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 EIF5A2Q9GZV4 153 aaKnown RBP10.71□□□□□ -0.7
USHBP1-201ENST00000252597 POLE3Q9NRF9 147 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 COPS7AQ9UBW8 275 aa10.71□□□□□ -0.7
USHBP1-201ENST00000252597 FAM221AA4D161 298 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 F5H5K5 113 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 SOCS1O15524 211 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 ITGB2P05107 769 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 ASAH2BP0C7U1 165 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 SERPINA2P20848 420 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 GLRA1P23415 457 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 ZNF93P35789 620 aaPredicted RBP10.7□□□□□ -0.7
USHBP1-201ENST00000252597 SLC25A1P53007 311 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 EGR3Q06889 387 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 PEA15Q15121 130 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 ZNF684Q5T5D7 378 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 ASPHD2Q6ICH7 369 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 LINC00114Q6XXX2 140 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 LANCL3Q6ZV70 420 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 RAB11FIP2Q7L804 512 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 SLC22A18ASQ8N1D0 253 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 TMEM104Q8NE00 496 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 MCHR2Q969V1 340 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 AKR1E2Q96JD6 320 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 OR5AC2Q9NZP5 309 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 GDF2Q9UK05 429 aaPredicted RBP10.7□□□□□ -0.7
USHBP1-201ENST00000252597 RPH3AQ9Y2J0 694 aaPredicted RBP10.7□□□□□ -0.7
USHBP1-201ENST00000252597 KCNK7Q9Y2U2 307 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 EP300Q09472 2414 aaPredicted RBP10.7□□□□□ -0.7
USHBP1-201ENST00000252597 IGKV1D-43A0A0B4J1Z2 117 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 PGCP20142 388 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 BIDP55957 195 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 BRICD5Q6PL45 260 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 ZNF283Q8N7M2 679 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 OR52N5Q8NH56 324 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 ELSPBP1Q96BH3 223 aa10.7□□□□□ -0.7
USHBP1-201ENST00000252597 ADAT3Q96EY9 351 aaPredicted RBP10.7□□□□□ -0.7
USHBP1-201ENST00000252597 PURGQ9UJV8 347 aaKnown RBP10.7□□□□□ -0.7
USHBP1-201ENST00000252597 TRAV36DV7A0A075B6V5 113 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 TRBV5-7A0A0A0MS05 114 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 FAM221BA6H8Z2 402 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 LINC01387J3KSC0 135 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 NME2P1O60361 137 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 GABRR1P24046 479 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 CTHP32929 405 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 SNU13P55769 128 aaKnown RBP10.69□□□□□ -0.7
USHBP1-201ENST00000252597 RPS4XP62701 263 aaKnown RBP10.69□□□□□ -0.7
USHBP1-201ENST00000252597 TOMM20Q15388 145 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 SP6Q3SY56 376 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 FAM69BQ5VUD6 431 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 RPL7L1Q6DKI1 246 aaKnown RBP10.69□□□□□ -0.7
USHBP1-201ENST00000252597 ADAM5Q6NVV9 412 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 TMEM229BQ8NBD8 167 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 RNF128Q8TEB7 428 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 EHFQ9NZC4 300 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 TRAV20A0A0B4J274 112 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 A0A1W2PNR3 127 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 ZNF14P17017 642 aaPredicted RBP10.69□□□□□ -0.7
USHBP1-201ENST00000252597 BCKDHBP21953 392 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 CPT2P23786 658 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms