RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CLDN12P56749 244 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 HERV-K104P61576 105 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 FAM53BQ14153 422 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 ZNF74Q16587 644 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 YOD1Q5VVQ6 348 aaPredicted RBP3.73□□□□□ -1.81
UBE4A-201ENST00000252108 PRSS41Q7RTY9 318 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 OR4N5Q8IXE1 308 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 CA13Q8N1Q1 262 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 OR13C5Q8NGS8 318 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 MFSD8Q8NHS3 518 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 BAHD1Q8TBE0 780 aaPredicted RBP3.73□□□□□ -1.81
UBE4A-201ENST00000252108 STT3BQ8TCJ2 826 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 SLC25A38Q96DW6 304 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 Q96M85 177 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 EIF5A2Q9GZV4 153 aaKnown RBP3.73□□□□□ -1.81
UBE4A-201ENST00000252108 TXNIPQ9H3M7 391 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 SEMA6CQ9H3T2 930 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 TAF9BQ9HBM6 251 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 CENPMQ9NSP4 180 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 OR52A1Q9UKL2 312 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 B3GALT5Q9Y2C3 310 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 CSAG2Q9Y5P2 127 aa3.73□□□□□ -1.81
UBE4A-201ENST00000252108 POM121BA6NF01 834 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 OR6C76A6NM76 312 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 ZNF726A6NNF4 738 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 UMAD1C9J7I0 102 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 HCRTR2O43614 444 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SCAF4O95104 1147 aaKnown RBP3.72□□□□□ -1.81
UBE4A-201ENST00000252108 CFDP00746 253 aaPredicted RBP3.72□□□□□ -1.81
UBE4A-201ENST00000252108 CD74P04233 296 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 ALOX5APP20292 161 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 PAX6P26367 422 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 NTSR1P30989 418 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 TAGLN2P37802 199 aaKnown RBP3.72□□□□□ -1.81
UBE4A-201ENST00000252108 PPICP45877 212 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 FUT7Q11130 342 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 RBM39Q14498 530 aaKnown RBP3.72□□□□□ -1.81
UBE4A-201ENST00000252108 STK11Q15831 433 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 MEP1BQ16820 701 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 MICBQ29980 383 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 AKIRIN2Q53H80 203 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 GLYATL3Q5SZD4 288 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 GPR157Q5UAW9 335 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SHEQ5VZ18 495 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 TMEM225Q6GV28 225 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 LRFN4Q6PJG9 635 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SLC22A25Q6T423 547 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SSX6Q7RTT6 188 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 LURAP1LQ8IV03 231 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 ZNF611Q8N823 705 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SUMF2Q8NBJ7 301 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SLC30A7Q8NEW0 376 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 OR52N5Q8NH56 324 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 RAB3CQ96E17 227 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 TCTN2Q96GX1 697 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 OR2S2Q9NQN1 319 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 PARP11Q9NR21 331 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 UFSP2Q9NUQ7 469 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 BSNQ9UPA5 3926 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 ZC3H12DA2A288 527 aaKnown RBP3.72□□□□□ -1.81
UBE4A-201ENST00000252108 C9orf170A2RU37 121 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 E5RGE8 158 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 ONECUT2O95948 504 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 CRHP06850 196 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 COX6B1P14854 86 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 CSNK2A1P68400 391 aaPredicted RBP3.72□□□□□ -1.81
UBE4A-201ENST00000252108 DEFA6Q01524 100 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 ID2Q02363 134 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 INSL4Q14641 139 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 EIF2S3LQ2VIR3 472 aaKnown RBP3.72□□□□□ -1.81
UBE4A-201ENST00000252108 C14orf28Q4W4Y0 310 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 ESPNLQ6ZVH7 1005 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 Q7L0L9 218 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 DPY19L4Q7Z388 723 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SULF2Q8IWU5 870 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 CLEC1AQ8NC01 280 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 CSNK2A3Q8NEV1 391 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 NUDCD2Q8WVJ2 157 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 C3orf49Q96BT1 292 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SLC25A36Q96CQ1 311 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 PTCHD1Q96NR3 888 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 RHOFQ9HBH0 211 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 UQCC1Q9NVA1 299 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 ASH2LQ9UBL3 628 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 DTX4Q9Y2E6 619 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 NSG2Q9Y328 171 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 HS3ST3A1Q9Y663 406 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 TMEM269A0A1B0GVZ9 245 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 A0A1W2PP55 124 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 OR52A4PA6NMU1 304 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 RNASEK-C17orf49H0YIS7 233 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SOX1O00570 391 aaPredicted RBP3.72□□□□□ -1.81
UBE4A-201ENST00000252108 PIN1P1O15428 100 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SLC31A1O15431 190 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 NPIPB7O75200 414 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SFT2D2O95562 160 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 SFTPBP07988 381 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 ANKRD34CP0C6C1 535 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 CPT2P23786 658 aa3.72□□□□□ -1.81
UBE4A-201ENST00000252108 RPL11P62913 178 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms