RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ZIC2O95409 532 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 RPS10P46783 165 aaKnown RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 FUT5Q11128 374 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 CHRDL2Q6WN34 429 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM200AQ86VY9 491 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 CCDC71LQ8N9Z2 235 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 OR56B1Q8NGI3 324 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 OR10Z1Q8NGY1 313 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 GLYATL2Q8WU03 294 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 FGF14Q92915 247 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ANKRD9Q96BM1 317 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 TRAV8-7A0A075B6U6 113 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 OR2C1O95371 312 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 OR13C7P0DN81 318 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 GALP22466 123 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ACSM1Q08AH1 577 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF529Q6P280 563 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF611Q8N823 705 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF709Q8N972 641 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 PHOSPHO2Q8TCD6 241 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 IL1F10Q8WWZ1 152 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 PRSS27Q9BQR3 290 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 MAGT1Q9H0U3 335 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 KLHDC2Q9Y2U9 406 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 RNASEK-C17orf49H0YIS7 233 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 BET1O15155 118 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 NXPH3O95157 252 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 CD79AP11912 226 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 CDAP32320 146 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 SLC35A1P78382 337 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 TFF2Q03403 129 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ARTNQ5T4W7 220 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM229BQ8NBD8 167 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 CCNL2Q96S94 520 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 R4GMQ9 66 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 PLXNA4Q9HCM2 1894 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 A0A0B4J293 547 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 A6NLC8 198 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 SPINT1O43278 529 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 BCL2L11O43521 198 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 CD226Q15762 336 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 DCAF12L2Q5VW00 463 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 FAM219AQ8IW50 185 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 GDF2Q9UK05 429 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 MMP17Q9ULZ9 603 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ITGB2P05107 769 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 DPP4P27487 766 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 NDUFA6P56556 154 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 PRICKLE4Q2TBC4 344 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 TRILQ7L0X0 811 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 KCNJ15Q99712 375 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 SULT4A1Q9BR01 284 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 CHRNA9Q9UGM1 479 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 TO15178 435 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 SEMA7AO75326 666 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ABOP16442 354 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF121P58317 390 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-201ENST00000249837 PDCD1Q15116 288 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 PDSS1Q5T2R2 415 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 SGCZQ96LD1 299 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 AICDAQ9GZX7 198 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 METTL9Q9H1A3 318 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ARFGEF3Q5TH69 2177 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 PCDH15Q96QU1 1955 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 C7orf66A4D0T2 115 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ALOX12BO75342 701 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 IGHV3-9P01782 118 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 RRASP10301 218 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 GABRG2P18507 467 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 RAG2P55895 527 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 GABREP78334 506 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 C19orf57Q0VDD7 668 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 OR51A4Q8NGJ6 313 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 C8orf44Q96CB5 159 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 C2orf50Q96LR7 162 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 C12orf57Q99622 126 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ANKRD10Q9NXR5 420 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM200CA6NKL6 621 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 IFNA2P01563 188 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 CXCL2P19875 107 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 CASRP41180 1078 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 SHHQ15465 462 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 LPAL2Q16609 132 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ADAM5Q6NVV9 412 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 LANCL3Q6ZV70 420 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 BPHLQ86WA6 291 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF321PQ8N8H1 164 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 PLPP5Q8NEB5 264 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 LIPHQ8WWY8 451 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 TSPAN32Q96QS1 320 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 GAS2L1Q99501 681 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-201ENST00000249837 SYT3Q9BQG1 590 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 TRAF4Q9BUZ4 470 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-201ENST00000249837 PIGMQ9H3S5 423 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ZFP64Q9NPA5 681 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 SLC5A6Q9Y289 635 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 TUBAL3A6NHL2 446 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 PLRG1O43660 514 aaKnown RBP4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ACAA2P42765 397 aaKnown RBP4.15□□□□□ -1.74
VPS13C-201ENST00000249837 TAS2R46P59540 309 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms