RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 IGHV4-61A0A0C4DH41 118 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 H3BNX3 289 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 RP2O75695 350 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 HLXQ14774 488 aaPredicted RBP20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 KRTAP21-3Q3LHN1 58 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 C12orf73Q69YU5 71 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 CYB5R2Q6BCY4 276 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 USP51Q70EK9 711 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 RNF133Q8WVZ7 376 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 HPS1Q92902 700 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 ZNF582Q96NG8 517 aaPredicted RBP20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 CIB1Q99828 191 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 PKP2Q99959 881 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 ABHD6Q9BV23 337 aa20.7■□□□□ 0.9
SDF2L1-201ENST00000248958 SAC3D1A6NKF1 404 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 IQCF6A8MYZ5 107 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 HSD11B1P28845 292 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 TNFAIP6P98066 277 aaPredicted RBP20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 SLC3A1Q07837 685 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 APOFQ13790 326 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 HFEQ30201 348 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 NAA40Q86UY6 237 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 OR8G5Q8NG78 346 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 OTOSQ8NHW6 89 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 GABARAPL3Q9BY60 117 aa20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 H2AFY2Q9P0M6 372 aaPredicted RBP20.69■□□□□ 0.9
SDF2L1-201ENST00000248958 CDC14BO60729 498 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 LILRA1O75019 489 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 LYNP07948 512 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 TNFRSF1AP19438 455 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 GK2Q14410 553 aaPredicted RBP20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 OR2T2Q6IF00 324 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 PGAP1Q75T13 922 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 ZNF283Q8N7M2 679 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 BBS1Q8NFJ9 593 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 OR13G1Q8NGZ3 307 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 TEAD3Q99594 435 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 OPA3Q9H6K4 179 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 IL19Q9UHD0 177 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 ORC6Q9Y5N6 252 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 TANC2Q9HCD6 1990 aa20.68■□□□□ 0.9
SDF2L1-201ENST00000248958 PPIHO43447 177 aaKnown RBP20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 PRKYO43930 277 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 SELENOFO60613 162 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 IGHV4-31P0DP07 118 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 PRKXP51817 358 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 EFNB1P98172 346 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 NXNL2Q5VZ03 156 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 Q6ZR03 302 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 SLC16A9Q7RTY1 509 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 MRPL21Q7Z2W9 205 aaKnown RBP20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 OR5AS1Q8N127 324 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 OR2Z1Q8NG97 314 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 TMEM163Q8TC26 289 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 YIPF3Q9GZM5 350 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 S100A14Q9HCY8 104 aa20.67■□□□□ 0.9
SDF2L1-201ENST00000248958 ABCA1O95477 2261 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 CLDN25C9JDP6 229 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 XRCC2O43543 280 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 H2BFMP0C1H6 154 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 EPHA2P29317 976 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 TCEANCQ8N8B7 351 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 THEM6Q8WUY1 208 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 SLC30A2Q9BRI3 323 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 YAE1D1Q9NRH1 226 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 USE1Q9NZ43 259 aa20.66■□□□□ 0.9
SDF2L1-201ENST00000248958 SLC22A31A6NKX4 558 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 OPRL1P41146 370 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 CX3CR1P49238 355 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 RAD23AP54725 363 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 TRIP10Q15642 601 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 SNAI3Q3KNW1 292 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 C6orf52Q5T4I8 152 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 SPATC1Q76KD6 591 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 MEPCEQ7L2J0 689 aaKnown RBP20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 GID4Q8IVV7 300 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 TIMD4Q96H15 378 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 POM121Q96HA1 1249 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 RIBC2Q9H4K1 309 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 NIPAL2Q9H841 368 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 TMEM100Q9NV29 134 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 LAMP5Q9UJQ1 280 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 NOP16Q9Y3C1 178 aaKnown RBP20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 TMEM14AQ9Y6G1 99 aa20.65■□□□□ 0.9
SDF2L1-201ENST00000248958 CCDC182A6NF36 153 aa20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 A8MV72 311 aaPredicted RBP20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 ALPLP05186 524 aa20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 NAA10P41227 235 aaPredicted RBP20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 AADACL4Q5VUY2 407 aa20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 OR52H1Q8NGJ2 320 aa20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 CCL17Q92583 94 aa20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 RAB1CQ92928 201 aa20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 REPIN1Q9BWE0 567 aaKnown RBP20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 SLC22A4Q9H015 551 aa20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 CSPG4Q6UVK1 2322 aa20.64■□□□□ 0.89
SDF2L1-201ENST00000248958 A0A1B0GWJ7 208 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 LRP5LA4QPB2 252 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 INAFM1C9JVW0 142 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 ANXA2P07355 339 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms