RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 NKPD1Q17RQ9 610 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 SCGB2B2Q4G0G5 96 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 TMED4Q7Z7H5 227 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF101Q8IZC7 436 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 BATF2Q8N1L9 274 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 PRSS35Q8N3Z0 413 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 FAM109AQ8N4B1 249 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF283Q8N7M2 679 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 ACBD4Q8NC06 268 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 FAM71CQ8NEG0 241 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 OR13C9Q8NGT0 318 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 OR14L1PQ8NHC6 308 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 FCAMRQ8WWV6 532 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 CITED4Q96RK1 184 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 MRPL39Q9NYK5 338 aaKnown RBP7.65□□□□□ -1.18
VPS4B-201ENST00000238497 ROS1P08922 2347 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 A0A0G2JK05 382 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 OR6C76A6NM76 312 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 MS4A18H0YCH9 400 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 ARPC1BO15143 372 aaKnown RBP7.65□□□□□ -1.18
VPS4B-201ENST00000238497 RER1O15258 196 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 UPK3AO75631 287 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 GATBO75879 557 aaKnown RBP7.65□□□□□ -1.18
VPS4B-201ENST00000238497 RFPL3SP0C7P2 107 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 PATE4P0C8F1 98 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 ADRA2CP18825 462 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 CCNOP22674 350 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 CRABP1P29762 137 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 THBS2P35442 1172 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 POU3F4P49335 361 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 SLC17A1Q14916 467 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 MS4A18Q3C1V0 323 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 YIF1BQ5BJH7 314 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 C11orf88Q6PI97 169 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 GRPEL2Q8TAA5 225 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 UCN2Q96RP3 112 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 NMNAT2Q9BZQ4 307 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 EXOSC3Q9NQT5 275 aaKnown RBP7.65□□□□□ -1.18
VPS4B-201ENST00000238497 OR5V1Q9UGF6 321 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 SPATA2Q9UM82 520 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 WIF1Q9Y5W5 379 aa7.65□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF814B7Z6K7 855 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 GPRIN2O60269 458 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 TCRBP04435 133 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 ENPP1P22413 925 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 HLA-DMAP28067 261 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 GRNP28799 593 aaKnown RBP7.65□□□□□ -1.19
VPS4B-201ENST00000238497 SSTR2P30874 369 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 PITPNAQ00169 270 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 PCGF3Q3KNV8 242 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 ABHD12BQ7Z5M8 362 aaPredicted RBP7.65□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF679Q8IYX0 411 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 RPRMLQ8N4K4 120 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF808Q8N4W9 903 aaPredicted RBP7.65□□□□□ -1.19
VPS4B-201ENST00000238497 LRRC75AQ8NAA5 344 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 ITLN2Q8WWU7 325 aaPredicted RBP7.65□□□□□ -1.19
VPS4B-201ENST00000238497 C11orf40Q8WZ69 217 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 CHST11Q9NPF2 352 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF69Q9UC07 566 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 ELF5Q9UKW6 265 aaPredicted RBP7.65□□□□□ -1.19
VPS4B-201ENST00000238497 MEMO1Q9Y316 297 aa7.65□□□□□ -1.19
VPS4B-201ENST00000238497 CPAMD8Q8IZJ3 1885 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 A0A0A6YYJ9 748 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 HMX3A6NHT5 357 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 FIGNL2A6NMB9 653 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 OR4C45A6NMZ5 311 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 MT-ATP6P00846 226 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 QDPRP09417 244 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 GTF2F2P13984 249 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 CFL1P23528 166 aaKnown RBP7.64□□□□□ -1.19
VPS4B-201ENST00000238497 DDOSTP39656 456 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 VEGFCP49767 419 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF782Q6ZMW2 699 aaPredicted RBP7.64□□□□□ -1.19
VPS4B-201ENST00000238497 CDC20BQ86Y33 519 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 FAM57AQ8TBR7 257 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 MARVELD3Q96A59 401 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 SARAFQ96BY9 339 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 ST6GAL2Q96JF0 529 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 SEC22CQ9BRL7 303 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 SYT7O43581 403 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 KRT33AO76009 404 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 H2AFB2P0C5Z0 115 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 CALCBP10092 127 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 COX6B1P14854 86 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 MAPK3P27361 379 aaPredicted RBP7.64□□□□□ -1.19
VPS4B-201ENST00000238497 GALNSP34059 522 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 KIR3DL2P43630 455 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 PTH2RP49190 550 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 HSF2Q03933 536 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 ALKBH2Q6NS38 261 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 MEIOBQ8N635 442 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 OR1J4Q8NGS1 313 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 OR51E1Q8TCB6 317 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 PAQR8Q8TEZ7 354 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 RND1Q92730 232 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 CMBLQ96DG6 245 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 OR8B4Q96RC9 309 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 DDOQ99489 341 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 SOX7Q9BT81 388 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 PLEKHA1Q9HB21 404 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms