RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 LIPCP11150 499 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 FOLR1P15328 257 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 HRH1P35367 487 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 CASRP41180 1078 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 CLDN6P56747 220 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 TAS2R31P59538 309 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 SNTB1Q13884 538 aaKnown RBP11.84□□□□□ -0.51
SRP54-201ENST00000216774 C1orf189Q5VU69 101 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 OR52W1Q6IF63 320 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 UQCC3Q6UW78 93 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 LANCL3Q6ZV70 420 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 OR2W3Q7Z3T1 314 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 OR10R2Q8NGX6 335 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 NUDCD2Q8WVJ2 157 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 C11orf40Q8WZ69 217 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 RELTQ969Z4 430 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 ZNF75AQ96N20 296 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 TPSD1Q9BZJ3 242 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 PIGMQ9H3S5 423 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 MOB1AQ9H8S9 216 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 MED29Q9NX70 200 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 ALKBH4Q9NXW9 302 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 SEMA5BQ9P283 1151 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 SUSD2Q9UGT4 822 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 A0A1W2PNV4 684 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 OR2AT4A6NND4 320 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 MPTX1A8MV57 137 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 TMEM14DPA8MWL7 114 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 ATP6V1G2-DDX39BF2Z307 99 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 SULT2B1O00204 365 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 SMAD9O15198 467 aaKnown RBP11.84□□□□□ -0.51
SRP54-201ENST00000216774 EFSO43281 561 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 IFNA6P05013 189 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 PPIAP62937 165 aaKnown RBP11.84□□□□□ -0.51
SRP54-201ENST00000216774 C5orf34Q96MH7 638 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 NPAS1Q99742 590 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 PTGES2Q9H7Z7 377 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 CTSFQ9UBX1 484 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 PCDH15Q96QU1 1955 aa11.83□□□□□ -0.51
SRP54-201ENST00000216774 PCNX3Q9H6A9 2034 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 LOC100509620A0A075B734 347 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 LIPT2A6NK58 231 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 VSTM2BA6NLU5 285 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 DBX1A6NMT0 343 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 ETV2O00321 342 aaPredicted RBP11.83□□□□□ -0.52
SRP54-201ENST00000216774 DUX1O43812 170 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 CHRM2P08172 466 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 CFHR1Q03591 330 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 INPP5JQ15735 1006 aaPredicted RBP11.83□□□□□ -0.52
SRP54-201ENST00000216774 ELP2Q6IA86 826 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 DEFB119Q8N690 84 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 ELP5Q8TE02 316 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 ARPC5LQ9BPX5 153 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 KCNK7Q9Y2U2 307 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 MYO9BQ13459 2157 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 FAM25EA8MYX2 175 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 SSX5O60225 188 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 GNB3P16520 340 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 VAMP1P23763 118 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 LAP3P28838 519 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 ZNF93P35789 620 aaPredicted RBP11.83□□□□□ -0.52
SRP54-201ENST00000216774 BIDP55957 195 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 FBXW4P57775 412 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 ATXN7L3Q14CW9 347 aaPredicted RBP11.83□□□□□ -0.52
SRP54-201ENST00000216774 SLC22A6Q4U2R8 563 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 THEM4Q5T1C6 240 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 AWAT2Q6E213 333 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 ATRAIDQ6UW56 229 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 RHOUQ7L0Q8 258 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 HOGA1Q86XE5 327 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 KMT5CQ86Y97 462 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 BPIFCQ8NFQ6 507 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 STOML3Q8TAV4 291 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 LRRC46Q96FV0 321 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 MRPL13Q9BYD1 178 aaKnown RBP11.83□□□□□ -0.52
SRP54-201ENST00000216774 TGIF2Q9GZN2 237 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 SERINC1Q9NRX5 453 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 ANAPC10Q9UM13 185 aa11.83□□□□□ -0.52
SRP54-201ENST00000216774 RPH3AQ9Y2J0 694 aaPredicted RBP11.83□□□□□ -0.52
SRP54-201ENST00000216774 TRBV6-7A0A0A0MS04 114 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 RAB19A4D1S5 217 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 F5H0A9 414 aaPredicted RBP11.82□□□□□ -0.52
SRP54-201ENST00000216774 GSTP1P09211 210 aaKnown RBP11.82□□□□□ -0.52
SRP54-201ENST00000216774 PSMB6P28072 239 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 AVPR2P30518 371 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 NXPH1P58417 271 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 MC2RQ01718 297 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 FOXF1Q12946 379 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 ACTBL2Q562R1 376 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 ANGPTL5Q86XS5 388 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 APCDD1LQ8NCL9 501 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 ADAD2Q8NCV1 583 aaKnown RBP11.82□□□□□ -0.52
SRP54-201ENST00000216774 OR10S1Q8NGN2 331 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 OR13C9Q8NGT0 318 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 FBXW5Q969U6 566 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 CDC6Q99741 560 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 NMES1Q9C002 83 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 FAM117AQ9C073 453 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 SELENOIQ9C0D9 397 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 PCED1AQ9H1Q7 454 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms