RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 4933407L21RikQ9D476 131 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm3550W4VSN7 160 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm5239D3YYZ2 122 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 C2cd6E9Q152 557 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vipr2P41588 437 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm5113Q3UGK8 141 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Pom121Q8K3Z9 1200 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vmn1r28Q8R2C9 302 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gabarapl1Q8R3R8 117 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mrps24Q9CQV5 167 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Sphk2Q9JIA7 617 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Sumo1P63166 101 aaKnown RBP15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Lrrn4clQ3TYX2 239 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ovch2Q7M761 609 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ffar4Q7TMA4 361 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1396Q7TQS8 315 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Fam124bQ8BLQ0 456 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Slc31a1Q8K211 196 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr99Q8VFE4 305 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gabra2P26048 451 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Sidt1Q6AXF6 827 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Spryd4Q91WK1 207 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cts7Q91ZF2 331 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mrpl3Q99N95 348 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Pfn4Q9D6I3 129 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Scgb1b15A0A087WP50 93 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Sbk3P0C5K0 361 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Scarb1Q61009 509 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1357Q7TQU7 313 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Folr1P35846 255 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Defb14Q7TNV9 67 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 RfxapQ8VCG9 231 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr870Q8VGG4 311 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1054Q8VGS7 312 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 P01636 108 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Pitx1P70314 315 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Zfp870J3QMA4 560 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 PdxpP60487 292 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Nme2Q01768 152 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Actrt3Q8BXF8 369 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Fgf21Q9JJN1 210 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Adam11Q9R1V4 773 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ifna1P01572 189 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Hoxd1Q01822 328 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tfb2mQ3TL26 396 aaKnown RBP15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mettl7a2Q5I0W6 244 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 St8sia3Q64689 380 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tnfsfm13Q8BXS2 410 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Syt17Q920M7 470 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Lrrc18Q9CQ07 262 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vps25Q9CQ80 176 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Hyal6Q9D4E9 494 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Il21rQ9JHX3 529 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gstz1Q9WVL0 216 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1222Q7TR02 311 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1113Q7TR54 326 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ccdc71Q8VEG0 433 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 1700080O16RikQ9D9G4 284 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 MgmtP26187 211 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1469Q8VFW5 309 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1497Q8VG11 314 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Q99K99 313 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Slc35a4Q9D321 324 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mapk7Q9WVS8 806 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ch25hQ9Z0F5 298 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm17067E9Q6S4 354 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Kcns1O35173 497 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Hs3st2Q673U1 367 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Fpr-rs7Q71MR7 338 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1301Q8VGE7 312 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tmem19Q91W52 336 aa15.3■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 D7Ertd443eD2J0Y4 644 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Alx3O70137 343 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Wnt7bP28047 349 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 SctQ08535 133 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Q24JP4 165 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gpr137bQ8BNQ3 385 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr780Q8VEU0 312 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr641Q8VGX6 312 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Slc19a3Q99PL8 488 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vmn1r53Q9EP93 310 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vmn2r89O35199 507 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Wsb1O54927 421 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 IfngP01580 155 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ca6P18761 317 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 CfiQ61129 603 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 EngQ63961 653 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vwc2Q8C8N3 324 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Sucnr1Q99MT6 317 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Pop4Q9CR08 221 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mpped2Q9CZJ0 294 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr944Q9EQ91 311 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1076A2AK60 313 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Adam10O35598 749 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm5460Q3UQ97 254 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 AtcayQ8BHE3 372 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Csnk1g1Q8BTH8 459 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Sertm1Q8CD78 107 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ntn4Q9JI33 628 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Qtrt1Q9JMA2 403 aa15.29■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 115.2 ms