RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Htr5aP30966 357 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 IgflQ6B9Z0 140 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gpatch2Q7TQC7 527 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Ifna12Q80SS5 189 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Pex12Q8VC48 359 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Dnmt3lQ9CWR8 421 aaKnown RBP12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Tmem128Q9CZB9 163 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Arpc1bQ9WV32 372 aaKnown RBP12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Asb3Q9WV72 525 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Cacna1sQ02789 1880 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Rnf212bD3Z423 297 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 ErgP81270 486 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Nxph2Q61199 261 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 B4gat1Q8BWP8 415 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Mmp28Q8CGV8 520 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Rfpl4aQ8VH31 287 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Psmg2Q9EST4 264 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 RangrfQ9JIB0 185 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Abca7Q91V24 2159 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Vmn1r174E9PYW5 313 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Vmn2r16E9Q025 850 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Vmn1r173E9Q8V7 313 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Ifna6P07350 189 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 AcheP21836 614 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 CryabP23927 175 aaKnown RBP12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Acp2P24638 423 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm5113Q3UGK8 141 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Lair1Q8BG84 263 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Stpg2Q8C8J0 561 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr582Q8VGV9 319 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr584Q8VGW0 319 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Cmtm8Q9CZR4 173 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr1034A0A1L1ST14 310 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Kcnk15B2RVL1 343 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 AgrpP56473 131 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Vmn1r195Q5SVD6 316 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Igsf5Q7TSN7 370 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Bend7Q8BSV3 434 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr353Q8VGK0 311 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Cdc42ep1Q91W92 409 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Cts7Q91ZF2 331 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Mc3rP33033 323 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr487Q7TRU9 314 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Mrpl58Q8R035 206 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Vmn1r28Q8R2C9 302 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Ccdc71Q8VEG0 433 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr639Q8VGY8 316 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Isl2Q9CXV0 359 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Raet1eQ9CZQ6 251 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Wif1Q9WUA1 379 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr284A0A0U1RP76 321 aa12.9□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr623E9Q382 317 aa12.9□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Meox1P32442 253 aa12.9□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Mcrip1Q3UGS4 97 aa12.9□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Scgb2b26Q8JZX1 112 aa12.9□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Exosc8Q9D753 276 aaKnown RBP12.9□□□□□ -0.35
Col5a1-201ENSMUST00000028280 PacrgQ9DAK2 241 aa12.9□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Mllt1Q9ERL0 547 aa12.9□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Wdr54Q9R0D8 334 aa12.9□□□□□ -0.35
Col5a1-201ENSMUST00000028280 H60cB1B213 197 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Gm2663F6R7E8 247 aaKnown RBP12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Cbr2P08074 244 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Mdga1Q0PMG2 940 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 MidnQ3TPJ7 465 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Zc3h12dQ8BIY3 533 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Fam120cQ8C3F2 1091 aaKnown RBP12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr827Q8VEV5 322 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Odf4Q8VI88 290 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 1810009J06RikQ9CPN7 247 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Mrpl41Q9CQN7 135 aaKnown RBP12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr1107A2AVB8 312 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Adam34A2RSG8 714 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Hs3st4D3YVV6 449 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Matn3O35701 481 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Bmpr1aP36895 532 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Bmpr1bP36898 502 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Elavl2Q60899 360 aaKnown RBP12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Vmn1r17Q8R2D8 303 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr434Q8VF17 321 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr47Q8VF18 321 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Med18Q9CZ82 208 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Samd8Q9DA37 478 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Syt9Q9R0N9 491 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 MokQ9WVS4 420 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Gm4969D3YZT1 566 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Wnt9bO35468 359 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Pcdh12O55134 1180 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Zp3rQ60736 579 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 CbarpQ66L44 698 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 PsphQ99LS3 225 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Klhdc8bQ9D2D9 354 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Pde7bQ9QXQ1 446 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Gpr31F8VQN3 319 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Vmn1r86L7N213 316 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Dnajb3O35723 242 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Cobll1Q3UMF0 1273 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Slc17a1Q61983 465 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Elfn1Q8C8T7 828 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Osgin1Q8VC10 478 aa12.89□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Dctn6Q9WUB4 190 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms