RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Rfwd3Q8CIK8 774 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Snapc5Q8R2K7 98 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Hspb2Q99PR8 182 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lrrc51Q9DAK8 192 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lbx2Q9WUN8 195 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr1493-ps1A0A140LHU2 316 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr747E9PXH6 313 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr749E9Q438 313 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tmem265E9Q8G3 109 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 ApelaP0DMC4 54 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 AhsgP29699 345 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Fv1P70213 459 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Mmp25Q3U435 615 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lin28bQ45KJ6 247 aaKnown RBP15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Prmt8Q6PAK3 394 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Acat3Q80X81 397 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Slc25a40Q8BGP6 337 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr1388Q8VFA3 311 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr651Q8VG78 313 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Ms4a8Q99N10 290 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Necab3Q9D6J4 353 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Ethe1Q9DCM0 254 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Igkv18-36A0A075B5M9 114 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Vmn1r174E9PYW5 313 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 CckbrP56481 453 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tie1Q06806 1134 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Q3TTL0 348 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Sdr39u1Q5M8N4 308 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Zdhhc8Q5Y5T5 762 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Cacfd1Q8BG21 171 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Gpn1Q8VCE2 372 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Dhcr24Q8VCH6 516 aaKnown RBP15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Hdac8Q8VH37 377 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Plpp7Q91WB2 271 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Smarcd2Q99JR8 531 aaKnown RBP15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Zfp810Q99K45 461 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Dram2Q9CR48 267 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Rnf128Q9D304 428 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Prl8a6Q9DAY2 240 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Twsg1Q9EP52 222 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Kcnmb4Q9JIN6 210 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Cpn1Q9JJN5 457 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Adam28Q9JLN6 793 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Gm21497A0A087WRK3 222 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr568E9Q554 313 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 FkbplO35450 347 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Irf1P15314 329 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tbx1P70323 479 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 PnkdQ69ZP3 385 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lpar4Q8BLG2 370 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Nsun5Q8K4F6 465 aaKnown RBP15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Mic13Q8R404 119 aaKnown RBP15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr279Q8VFD8 310 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Sfxn1Q99JR1 322 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Slc22a17Q9D9E0 401 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lypd2Q9DD23 127 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Fam89bQ9QUI1 189 aa15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Ilf3Q9Z1X4 898 aaKnown RBP15.21■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Serpina3jD3Z451 420 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn2r49D3Z6L3 852 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn2r30K7N5W1 852 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn2r32K7N686 852 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm8660K7N6J2 305 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn2r47K7N709 852 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn2r42O35192 852 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Csn1s2aQ02862 184 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 HgsnatQ3UDW8 656 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 CishQ62225 257 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Nhlrc2Q8BZW8 725 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr401Q8VFX6 315 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 QprtQ91X91 299 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Nop16Q9CPT5 178 aaKnown RBP15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Trim2Q9ESN6 744 aaKnown RBP15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 D17h6s53eQ9Z1R4 293 aa15.21■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr1191-ps1A0A1L1STD5 311 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ptrhd1D3Z4S3 140 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr373E9Q4J3 314 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Bcl2l11O54918 196 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Hbb-bh1P04444 147 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Adh5P28474 374 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Rasd2P63032 266 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tmem231Q3U284 315 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm1673Q3UR78 90 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Taar7dQ5QD10 358 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Elavl3Q60900 367 aaKnown RBP15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr372Q7TRY2 314 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Atpaf1Q811I0 324 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Zbtb46Q8BID6 600 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Serinc2Q8K0E7 450 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ctxn1Q8K129 82 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Cbr3Q8K354 277 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 CcnqQ8QZR8 250 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Slc35a3Q8R1T4 326 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Slc22a26Q91WJ2 552 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 NubplQ9CWD8 319 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ms4a4aA0A087WRT7 236 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Obp1bA2AEP0 171 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm14743A2BHD2 171 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 ItpkbB2RXC2 942 aa15.2■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r137D3YTY1 307 aa15.2■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms