RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 St3gal2Q11204 350 aa16.89■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 B3gnt4Q1RLK6 350 aa16.89■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 NagpaQ8BJ48 517 aa16.89■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Rtn4ip1Q924D0 396 aa16.89■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Ankrd22Q9D3J5 191 aa16.89■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 March7Q9WV66 693 aa16.89■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Gm4177D3YTX5 305 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Gm3543D3Z235 184 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Vmn1r127K7N6J5 305 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Vmn1r142K7N6U0 305 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Vmn1r159K7N701 305 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Vmn2r28L7N203 852 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Slc28a2O88627 660 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Acsf3Q3URE1 583 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Pced1aQ6P1Z5 449 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr17Q7TRM9 315 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Comtd1Q8BIG7 262 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr593Q8VF28 327 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr73Q920P2 313 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Lingo1Q9D1T0 614 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Tssk4Q9D411 328 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Serpinb7Q9D695 380 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Tysnd1Q9DBA6 568 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 RhagQ9QUT0 438 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Insl6Q9QY05 191 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Cyp4a30bA0A087WS15 508 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Zfp81B8JJZ7 531 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Cdh19E9Q3A7 770 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Wisp1O54775 367 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 S100a13P97352 98 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 4933415F23RikQ14BX6 153 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 SprQ64105 261 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Zfp82Q6P9Y7 530 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Tas2r116Q7M713 305 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr205Q7TS37 305 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 LipkQ8BM14 398 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Ip6k3Q8BWD2 396 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Slc25a28Q8R0Z5 364 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 MetrnlQ8VE43 311 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr1094Q8VF13 330 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Ddit4lQ8VHZ5 193 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Elovl6Q920L5 267 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Il24Q925S4 181 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 PaplnQ9EPX2 1280 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 MthfrQ9WU20 654 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Pcsk5Q04592 1877 aa16.88■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Ino80eA0A0U1RP99 260 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Trav12-2A0N8N6 114 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 4931422A03RikA2BHN9 113 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Vmn1r67G5E8C1 305 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Gm8857L7N291 182 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Raet1cO08604 253 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Pgam2O70250 253 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Abcd4O89016 606 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Ctla4P09793 223 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Nos3P70313 1202 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Faap20Q3UN58 186 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Ptpn21Q62136 1176 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Zfp933Q6PEE4 468 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Fbxo22Q78JE5 402 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr884Q7TRE1 309 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Scmh1Q8K214 706 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Agpat2Q8K3K7 278 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Vmn1r56Q9EPS9 310 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Plek2Q9WV52 353 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr1066A2AK62 313 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Gm8660K7N6J2 305 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 H1f0P10922 194 aaKnown RBP16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Rpl27P61358 136 aaKnown RBP16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Gabra1P62812 455 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Adgrg5Q3V3Z3 524 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Fpr-rs7Q71MR7 338 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Zfp748Q7TPL6 888 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr1061Q7TR72 313 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 CcinQ8CDE2 588 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Zdhhc1Q8R0N9 484 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr1241Q8VF91 314 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 St3gal6Q8VIB3 329 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Slc27a4Q91VE0 643 aaKnown RBP16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Mrgpra8Q91ZC4 305 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Sytl3Q99N48 607 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Smim3Q99PE5 60 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Nkx2-4Q9EQM3 354 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Gpx2Q9JHC0 190 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 H2afb3S4R1G7 115 aa16.87■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Gm10358A0A1D5RLD8 333 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Pi4kaE9Q3L2 2105 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 GapdhP16858 333 aaKnown RBP16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Arhgap9Q1HDU4 648 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Med16Q6PGF3 828 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Bdh1Q80XN0 343 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Lmf2Q8C3X8 702 aaKnown RBP16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 SbsnQ8CIT9 700 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Katnal1Q8K0T4 488 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Rab7bQ8VEA8 199 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr378Q8VGT2 314 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Olfr584Q8VGW0 319 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 TsfmQ9CZR8 324 aa16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 Mrto4Q9D0I8 239 aaKnown RBP16.86■□□□□ 0.29
Shkbp1-201ENSMUST00000003857 MeiobQ9D513 470 aa16.86■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 75.9 ms