RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Prps1Q9D7G0 318 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Erv3Q9DAX3 200 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Vmn2r49D3Z6L3 852 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Ogg1O08760 345 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Capza2P47754 286 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 S100a13P97352 98 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 GnrhrQ01776 327 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Lin54Q571G4 749 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 ArhgdigQ62160 225 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Znf511Q6P0X2 227 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr1166Q7TR27 316 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Dtx3Q80V91 347 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 2610318N02RikQ80VT5 305 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Stk35Q80ZW0 539 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr646Q8VGW2 312 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Spef1Q99JL1 234 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Ndufb7Q9CR61 137 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Rnf128Q9D304 428 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Lrrc51Q9DAK8 192 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Nxt1Q9QZV9 140 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Gm12789B1AUV7 164 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr68E9PYY2 315 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Slc28a2O88627 660 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Nfkbil1O88995 381 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Ackr3P56485 362 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Nos3P70313 1202 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Csrp1P97315 193 aaKnown RBP14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Adam5Q3TTE0 751 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Krt33bQ61897 404 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Rpa2Q62193 270 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr1286Q7TQY2 305 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr967Q7TRA6 310 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Slc35d3Q8BGF8 422 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Lmf2Q8C3X8 702 aaKnown RBP14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 SbsnQ8CIT9 700 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 BlvrbQ923D2 206 aaKnown RBP14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Sfxn5Q925N0 342 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Sytl3Q99N48 607 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Suv39h2Q9EQQ0 477 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Tnfrsf22Q9ER62 198 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Naa10Q9QY36 235 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Fam90a1aA2A4E2 429 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr1205A2ATJ7 307 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Mllt6B1AR10 1109 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Rd3lB2RV38 197 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Vmn1r120K7N6J6 305 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 NodalP43021 354 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Slc5a12Q49B93 619 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 ArhgdibQ61599 200 aaKnown RBP14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Pced1aQ6P1Z5 449 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Zfp933Q6PEE4 468 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Colec10Q8CF98 277 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Il17rcQ8K4C2 698 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Aimp2Q8R010 320 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr998Q8VF76 314 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr1163Q8VFR4 316 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 St3gal6Q8VIB3 329 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Galnt11Q921L8 608 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Dusp22Q99N11 184 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Wdsub1Q9D0I6 474 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Mfsd4b2Q9D8I5 366 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 1700013G24RikQ9DAC6 286 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Slc2a8Q9JIF3 477 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 LipgQ9WVG5 500 aa14.81□□□□□ -0.04
Shh-201ENSMUST00000002708 Gm11634A0A1B0GSX1 172 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 2010106E10RikA2ANY3 279 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Rbbp9O88851 186 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 ElocP83940 112 aaKnown RBP14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Gm1123Q1RME4 390 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Slc39a12Q5FWH7 689 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Bloc1s3Q5U5M8 195 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 H2-M2Q6W9L1 343 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr1168Q7TR25 312 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Bhlhe23Q8BGW3 223 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Ip6k3Q8BWD2 396 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr351Q8VGK1 310 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Mrgpra4Q91WW2 313 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Tinagl1Q99JR5 466 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Asb12Q9D738 308 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 4931422A03RikA2BHN9 113 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr597L7N224 315 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Fgf14P70379 247 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Epha6Q62413 1035 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Zc4h2Q68FG0 224 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Ube2j2Q6P073 259 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr1061Q7TR72 313 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Sec22aQ8BH47 307 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Prkd2Q8BZ03 875 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 CdnfQ8CC36 187 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Sntb1Q99L88 537 aaKnown RBP14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Oasl2Q9Z2F2 508 aa14.8□□□□□ -0.04
Shh-201ENSMUST00000002708 Gm21858A0A087WQ24 222 aa14.79□□□□□ -0.04
Shh-201ENSMUST00000002708 CK137956B1AYM9 596 aa14.79□□□□□ -0.04
Shh-201ENSMUST00000002708 Gm8159E9Q0R1 267 aa14.79□□□□□ -0.04
Shh-201ENSMUST00000002708 Hmgn2P09602 90 aa14.79□□□□□ -0.04
Shh-201ENSMUST00000002708 PnmtP40935 295 aa14.79□□□□□ -0.04
Shh-201ENSMUST00000002708 Casp3P70677 277 aa14.79□□□□□ -0.04
Shh-201ENSMUST00000002708 Zfp180Q6NZI9 655 aa14.79□□□□□ -0.04
Shh-201ENSMUST00000002708 MffQ6PCP5 291 aa14.79□□□□□ -0.04
Shh-201ENSMUST00000002708 Fbxo22Q78JE5 402 aa14.79□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms