RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 UBBP0CG47 229 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 UBCP0CG48 685 aaKnown RBP12.34□□□□□ -0.43
PHGDH-233ENST00000642021 CRABP1P29762 137 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 DCAF7P61962 342 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 RPS27AP62979 156 aaKnown RBP12.34□□□□□ -0.43
PHGDH-233ENST00000642021 UBA52P62987 128 aaKnown RBP12.34□□□□□ -0.43
PHGDH-233ENST00000642021 SRSF4Q08170 494 aaKnown RBP12.34□□□□□ -0.43
PHGDH-233ENST00000642021 C1orf189Q5VU69 101 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF813Q6ZN06 617 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 LANCL3Q6ZV70 420 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 MOB3CQ70IA8 216 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 GLS2Q9UI32 602 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 IGHV3-20A0A0C4DH32 117 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF354AO60765 605 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF823P16415 610 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 AGTR1P30556 359 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 PNLIPRP2P54317 469 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 TRAPPC6BQ86SZ2 158 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 SLC25A42Q86VD7 318 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 CHST4Q8NCG5 386 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 OR1N1Q8NGS0 311 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 OR1L3Q8NH93 324 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 ZC3H10Q96K80 434 aaKnown RBP12.34□□□□□ -0.43
PHGDH-233ENST00000642021 FOXQ1Q9C009 403 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 C8orf33Q9H7E9 229 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-233ENST00000642021 SLC5A6Q9Y289 635 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 SDK1Q7Z5N4 2213 aa12.33□□□□□ -0.43
PHGDH-233ENST00000642021 CPED1A4D0V7 1026 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 DNASE2O00115 360 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-233ENST00000642021 LTBRP36941 435 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 CD96P40200 585 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 EIF1AXP47813 144 aaKnown RBP12.33□□□□□ -0.44
PHGDH-233ENST00000642021 ADAD2Q8NCV1 583 aaKnown RBP12.33□□□□□ -0.44
PHGDH-233ENST00000642021 ADAT3Q96EY9 351 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-233ENST00000642021 ZNF471Q9BX82 626 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-233ENST00000642021 FN3KRPQ9HA64 309 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 CPAMD8Q8IZJ3 1885 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 KANTRA0A1W2PQU2 76 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 OR2AT4A6NND4 320 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 DCNP07585 359 aaKnown RBP12.33□□□□□ -0.44
PHGDH-233ENST00000642021 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
PHGDH-233ENST00000642021 GNB3P16520 340 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 STARP49675 285 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 FGL1Q08830 312 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 OR7A5Q15622 319 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 PCK2Q16822 640 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 RNASE10Q5GAN6 216 aaKnown RBP12.33□□□□□ -0.44
PHGDH-233ENST00000642021 ZNF441Q8N8Z8 693 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 ASB10Q8WXI3 467 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 DAZLQ92904 295 aaKnown RBP12.33□□□□□ -0.44
PHGDH-233ENST00000642021 EMC6Q9BV81 110 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 VN1R1Q9GZP7 353 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 ZC4H2Q9NQZ6 224 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 TAS2R3Q9NYW6 316 aa12.33□□□□□ -0.44
PHGDH-233ENST00000642021 A0A0A6YYH2 397 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 C9orf170A2RU37 121 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 A6NJ64 397 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 DISC1C4P0D8 188 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 VSIG8P0DPA2 414 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 SLC25A4P12235 298 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 HRH1P35367 487 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 QRFPP83859 136 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 CFHR1Q03591 330 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 PTCRAQ6ISU1 281 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-233ENST00000642021 OR2W3Q7Z3T1 314 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 LYG2Q86SG7 212 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 BPIFCQ8NFQ6 507 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 CASTOR1Q8WTX7 329 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 UCK1Q9HA47 277 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 ATXN7L1Q9ULK2 861 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-233ENST00000642021 FAM74A7A6NL05 159 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 SHISA8B8ZZ34 492 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 BCL2L11O43521 198 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 OR2T1O43869 369 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 ZNF217O75362 1048 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 OR2F2O95006 317 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 TTRP02766 147 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 ERCC1P07992 297 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-233ENST00000642021 FOLR1P15328 257 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 DLSTP36957 453 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 GNALP38405 381 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 OR1D5P58170 312 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 IL13RA1P78552 427 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 DEFA5Q01523 94 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 TDGQ13569 410 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 OR2F1Q13607 317 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 FAM74A3Q4VXF1 159 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 SLC29A4Q7RTT9 530 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 C17orf82Q86X59 251 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-233ENST00000642021 ZNF248Q8NDW4 579 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 OR2I1PQ8NGU4 316 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 PTX4Q96A99 478 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 LRRC46Q96FV0 321 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 SPACA5Q96QH8 159 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 COMMD9Q9P000 198 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 ZNF107Q9UII5 783 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-233ENST00000642021 RAB22AQ9UL26 194 aa12.32□□□□□ -0.44
PHGDH-233ENST00000642021 STK17BO94768 372 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms