RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ZNF727A8MUV8 499 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 LRP3O75074 770 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 ICOSLGO75144 302 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 TSPAN12O95859 305 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 PDGFBP01127 241 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-213ENST00000638680 TMEM11P17152 192 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 CD22P20273 847 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 S100A7P31151 101 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 FABP6P51161 128 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 SLC17A1Q14916 467 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF77Q15935 545 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 TBC1D28Q2M2D7 210 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 SPANXN5Q5MJ07 72 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 C2orf50Q96LR7 162 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 HS3ST3A1Q9Y663 406 aa16.81■□□□□ 0.28
SCARB2-213ENST00000638680 OPRM1P35372 400 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 GABRA4P48169 554 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 OR5AS1Q8N127 324 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 CA13Q8N1Q1 262 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 SLC25A43Q8WUT9 341 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-213ENST00000638680 SLCO1C1Q9NYB5 712 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 TRAPPC4Q9Y296 219 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 PRSS37A4D1T9 235 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 DVL1O14640 695 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 DVL1P1P54792 670 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-213ENST00000638680 RAB1AP62820 205 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 GPNMBQ14956 572 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 CMTM2Q8TAZ6 248 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 RYDENQ9NUL5 291 aaKnown RBP16.8■□□□□ 0.28
SCARB2-213ENST00000638680 TRAV1-2A0A0B4J238 106 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 GUCA2AQ02747 115 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 TRIM61Q5EBN2 209 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF626Q68DY1 528 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 OR5AP2Q8NGF4 316 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 S1PR5Q9H228 398 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 PLEKHA2Q9HB19 425 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 SIRT5Q9NXA8 310 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 SSUH2Q9Y2M2 353 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 TRBV5-4A0A0C4DH59 114 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 PRKNO60260 465 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-213ENST00000638680 NME1P15531 152 aaKnown RBP16.8■□□□□ 0.28
SCARB2-213ENST00000638680 TM4SF4P48230 202 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 ADPRHP54922 357 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 RXFP4Q8TDU9 374 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 OR2A14Q96R47 310 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 S100A8P05109 93 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 CD37P11049 281 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 CLRN3Q8NCR9 226 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 SIGLEC11Q96RL6 698 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 PBOV1Q9GZY1 135 aa16.8■□□□□ 0.28
SCARB2-213ENST00000638680 TO15178 435 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 OR2AE1Q8NHA4 323 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 NDRG3Q9UGV2 375 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 CTXN2P0C2S0 81 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 BTG2P78543 158 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF90Q03938 601 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 THEM4Q5T1C6 240 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 PYCARD-AS1I3L0S3 204 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 BTNL8Q6UX41 500 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 DBX2Q6ZNG2 339 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 EXD3Q8N9H8 876 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 H1FXQ92522 213 aaKnown RBP16.79■□□□□ 0.28
SCARB2-213ENST00000638680 RPUSD4Q96CM3 377 aaKnown RBP16.79■□□□□ 0.28
SCARB2-213ENST00000638680 C12orf73Q69YU5 71 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 ATOH1Q92858 354 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-213ENST00000638680 LANCL2Q9NS86 450 aa16.79■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF561Q8N587 486 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 BPIFCQ8NFQ6 507 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF355PQ9NSJ1 428 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 PLEKHB1Q9UF11 243 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-213ENST00000638680 GLAP06280 429 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 ZP3P21754 424 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 PCK2Q16822 640 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF468Q5VIY5 522 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-213ENST00000638680 GLDNQ6ZMI3 551 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-213ENST00000638680 MAMSTRQ6ZN01 415 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 CAMKMTQ7Z624 323 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 THNSL2Q86YJ6 484 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 PATE1Q8WXA2 126 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 POMT2Q9UKY4 750 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 A0A1W2PNR3 127 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 GSK3AP49840 483 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 ZNF787Q6DD87 383 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 LHFPL2Q6ZUX7 228 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 GALNT16Q8N428 558 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 CTSLP07711 333 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 METTL15P1P0C7V9 234 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 IAPPP10997 89 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 PRAMEF5Q5TYX0 476 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 PRAMEF6Q5VXH4 476 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 OR13D1Q8NGV5 346 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 OR51I2Q9H344 312 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 HSPB2A8KAH6 182 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 AKR1C3P42330 323 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 HSPB2Q16082 182 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 OR2B11Q5JQS5 317 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 CLLU1Q5K131 121 aa16.78■□□□□ 0.28
SCARB2-213ENST00000638680 B3GALNT1O75752 331 aa16.77■□□□□ 0.28
SCARB2-213ENST00000638680 ACSM4P0C7M7 580 aa16.77■□□□□ 0.28
SCARB2-213ENST00000638680 PRR35P0CG20 571 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms