RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ERVS71-1P61550 626 aa13.86□□□□□ -0.19
UBE3A-227ENST00000638011 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
UBE3A-227ENST00000638011 PNPLA1Q8N8W4 532 aa13.86□□□□□ -0.19
UBE3A-227ENST00000638011 LRRC3BQ96PB8 259 aa13.86□□□□□ -0.19
UBE3A-227ENST00000638011 OR5V1Q9UGF6 321 aa13.86□□□□□ -0.19
UBE3A-227ENST00000638011 RRP8O43159 456 aaKnown RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 WDR1O75083 606 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 OR5AL1P0C617 328 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 SYT9Q86SS6 491 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 THAP3Q8WTV1 239 aaPredicted RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 BCL7CQ8WUZ0 217 aaPredicted RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 CPPED1Q9BRF8 314 aaPredicted RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 EGLN1Q9GZT9 426 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 ING1Q9UK53 422 aaPredicted RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 TMED3Q9Y3Q3 217 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 IFITM5A6NNB3 132 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 RPL11P62913 178 aaKnown RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 SRYQ05066 204 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 SMN1Q16637 294 aaKnown RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 DHRS13Q6UX07 377 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 GDPD3Q7L5L3 318 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 NUDT16L1Q9BRJ7 211 aaKnown RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 MARCH4Q9P2E8 410 aaPredicted RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 PDCD11Q14690 1871 aaKnown RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 CDRT15L2A8MXV6 281 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 HIST1H1BP16401 226 aaKnown RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 ALOX5APP20292 161 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 SRP9P49458 86 aaKnown RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 CLDN10P78369 228 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 ANGPTL5Q86XS5 388 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 RXFP4Q8TDU9 374 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 IKZF4Q9H2S9 585 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 ARNT2Q9HBZ2 717 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 M0QYG6 137 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 MRPL33O75394 65 aaKnown RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 ZNF140P52738 457 aaPredicted RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 CTF1Q16619 201 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 KIAA1958Q8N8K9 716 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 TREX1Q9NSU2 369 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 TIMM8AO60220 97 aaPredicted RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 VWA2Q5GFL6 755 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 WDR74Q6RFH5 385 aaPredicted RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 OR5D13Q8NGL4 314 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 OLIG1Q8TAK6 271 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 NEIL2Q969S2 332 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 TAAR6Q96RI8 345 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 C1QTNF3Q9BXJ4 246 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 OCEL1Q9H607 264 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 AKIP1Q9NQ31 210 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 FAM206AQ9NX38 181 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 GPR75O95800 540 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 ANKRD34CP0C6C1 535 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 OR8G3PP0DMU2 310 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 FOLR3P41439 243 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 FOXK2Q01167 660 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 ELFN2Q5R3F8 820 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 SLC25A43Q8WUT9 341 aaPredicted RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 KCNE4Q8WWG9 221 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 TTC9Q92623 222 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 FBXW5Q969U6 566 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 MENTQ9BUN1 341 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 SNRPEP62304 92 aaKnown RBP13.85□□□□□ -0.19
UBE3A-227ENST00000638011 PSAPL1Q6NUJ1 521 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 SYS1Q8N2H4 156 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 Q9N2K0 584 aa13.85□□□□□ -0.19
UBE3A-227ENST00000638011 PGA4P0DJD7 388 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 PGA5P0DJD9 388 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 CARD18P57730 90 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 RABEPKQ7Z6M1 372 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 OR52I2Q8NH67 350 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 CPEB1Q9BZB8 566 aaKnown RBP13.84□□□□□ -0.19
UBE3A-227ENST00000638011 AQP7O14520 342 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 ARRB2P32121 409 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 OR52L2PQ8NGH6 319 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 OR1L3Q8NH93 324 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 POM121BA6NF01 834 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 HNRNPA1P09651 372 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBE3A-227ENST00000638011 SMIM18P0DKX4 95 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 LIPAP38571 399 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 MANEAQ5SRI9 462 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 DRAM2Q6UX65 266 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 NECTIN4Q96NY8 510 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 RAB40CQ96S21 281 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 WNT11O96014 354 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 SLC25A6P12236 298 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 EN2P19622 333 aaPredicted RBP13.84□□□□□ -0.19
UBE3A-227ENST00000638011 SIX1Q15475 284 aaPredicted RBP13.84□□□□□ -0.19
UBE3A-227ENST00000638011 CACNA1EQ15878 2313 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 MRC1P22897 1456 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 LEFTY2O00292 366 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 TTRP02766 147 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 OR2T6Q8NHC8 308 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 BOD1Q96IK1 185 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 C6orf201Q7Z4U5 140 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 CA12O43570 354 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 FAM189BP81408 668 aa13.84□□□□□ -0.19
UBE3A-227ENST00000638011 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
UBE3A-227ENST00000638011 EXOGQ9Y2C4 368 aaKnown RBP13.84□□□□□ -0.19
UBE3A-227ENST00000638011 HEMK1Q9Y5R4 338 aaPredicted RBP13.84□□□□□ -0.19
UBE3A-227ENST00000638011 PRAMEF25A6NGN4 478 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms