RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 JAM3Q9BX67 310 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 TRBV5-3A0A0A0MS03 114 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 C5orf49A4QMS7 147 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 SSX4O60224 188 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 ATG12O94817 140 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 RAF1P04049 648 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 LPLP06858 475 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 PPP3CBP16298 524 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 SPINK2P20155 84 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 DUSP1P28562 367 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 PLA2G7Q13093 441 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 CLN3Q13286 438 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 WIPI1Q5MNZ9 446 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-219ENST00000636466 LINC00299Q6ZSB3 139 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 KLHDC8BQ8IXV7 354 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 GABRG1Q8N1C3 465 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 SLC43A2Q8N370 569 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 ZNF610Q8N9Z0 462 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 APH1BQ8WW43 257 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 SSX3Q99909 188 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 HRASLSQ9HDD0 168 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 GDF2Q9UK05 429 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-219ENST00000636466 PUS1Q9Y606 427 aaKnown RBP eCLIP12.83□□□□□ -0.36
GABRB3-219ENST00000636466 MBTPS2O43462 519 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 GLULP15104 373 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 PAN3Q58A45 887 aaKnown RBP12.83□□□□□ -0.36
GABRB3-219ENST00000636466 C17orf107Q6ZR85 190 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 TMPRSS11FQ6ZWK6 438 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 DOK3Q7L591 496 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 OR4S1Q8NGB4 309 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 C11orf40Q8WZ69 217 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 SPACA9Q96E40 222 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-219ENST00000636466 ERVMER34-1Q9H9K5 563 aa12.83□□□□□ -0.36
GABRB3-219ENST00000636466 DNAJB12Q9NXW2 375 aaKnown RBP12.83□□□□□ -0.36
GABRB3-219ENST00000636466 EXO1Q9UQ84 846 aaKnown RBP12.83□□□□□ -0.36
GABRB3-219ENST00000636466 H3BMH7 237 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 YKT6O15498 198 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 VAMP5O95183 116 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 RBP2P50120 134 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 PCDHB10Q9UN67 800 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 MSTNO14793 375 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 CHRM2P08172 466 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 HMGA2P52926 109 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 MYBPHQ13203 477 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 DOC2BQ14184 412 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 TOMM34Q15785 309 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-219ENST00000636466 EMC4Q5J8M3 183 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 DMBX1Q8NFW5 382 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 PBOV1Q9GZY1 135 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 SBF2Q86WG5 1849 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 CXorf51AA0A1B0GTR3 108 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 SULT1B1O43704 296 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 IGHA2P01877 340 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 TNFSF4P23510 183 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 CDKN2AP42771 156 aaKnown RBP12.82□□□□□ -0.36
GABRB3-219ENST00000636466 ZNF121P58317 390 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-219ENST00000636466 CAMK2BQ13554 666 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 OR2B11Q5JQS5 317 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 THEM4Q5T1C6 240 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 UBALD1Q8TB05 177 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 C1orf123Q9NWV4 160 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
GABRB3-219ENST00000636466 DHHO43323 396 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 MPZL1O95297 269 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 CRYBB2P43320 205 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 MDGA2Q7Z553 956 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 A0A1W2PQF6 199 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 HSD17B6O14756 317 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 WDR1O75083 606 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 CLDN1O95832 211 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 POU3F3P20264 500 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-219ENST00000636466 BCKDHBP21953 392 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 NFYBP25208 207 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 PTGER4P35408 488 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 ETFDHQ16134 617 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 SPATA46Q5T0L3 261 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 CD276Q5ZPR3 534 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 EMG1Q92979 244 aaKnown RBP12.81□□□□□ -0.36
GABRB3-219ENST00000636466 SLCO5A1Q9H2Y9 848 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 ZCCHC4Q9H5U6 513 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 EP400Q96L91 3159 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 WISP3O95389 354 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-219ENST00000636466 PMS2P2O95744 297 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 CBR1P16152 277 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 DDOSTP39656 456 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 CEACAM16Q2WEN9 425 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 RELL2Q8NC24 303 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-219ENST00000636466 GABRG3Q99928 467 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 TINAGL1Q9GZM7 467 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-219ENST00000636466 S1PR5Q9H228 398 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 A0A0D9SG52 128 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 A0A1W2PPV9 198 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 C1orf196B1AJZ1 125 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 RER1O15258 196 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 CD226Q15762 336 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 RFPL4BQ6ZWI9 263 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 SLC25A26Q70HW3 274 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 MARCH1Q8TCQ1 289 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 PTTG3PQ9NZH4 202 aa12.81□□□□□ -0.36
GABRB3-219ENST00000636466 A0A1W2PPV4 95 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms