RNA–Protein interactions for RNA: ENST00000631289.1

CHRNA4-214, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-214ENST00000631289 NEIL1Q96FI4 390 aaPredicted RBP17.46■□□□□ 0.39
CHRNA4-214ENST00000631289 ZNF48Q96MX3 618 aaPredicted RBP17.46■□□□□ 0.39
CHRNA4-214ENST00000631289 HCAR1Q9BXC0 346 aa17.46■□□□□ 0.39
CHRNA4-214ENST00000631289 TMEM100Q9NV29 134 aa17.46■□□□□ 0.39
CHRNA4-214ENST00000631289 IQCF6A8MYZ5 107 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 F5H5P2 479 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 H0YL77 283 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 GMNNO75496 209 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 IRF2P14316 349 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 NUDT2P50583 147 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 MEP1BQ16820 701 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 ZNF181Q2M3W8 571 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 SMARCD3Q6STE5 483 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 HACD2Q6Y1H2 254 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 JAZF1Q86VZ6 243 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 OR8B3Q8NGG8 313 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 RAB40AQ8WXH6 277 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 C1orf147Q96MC9 270 aaPredicted RBP17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 TSSK2Q96PF2 358 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 ERMAPQ96PL5 475 aaPredicted RBP17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 OR8B2Q96RD0 313 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 SLC30A2Q9BRI3 323 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 ZNF696Q9H7X3 374 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 NDUFAF4Q9P032 175 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 LHFPL6Q9Y693 200 aa17.45■□□□□ 0.38
CHRNA4-214ENST00000631289 IGHV3OR16-10A0A075B7F0 116 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 IGHV2-70DA0A0C4DH43 119 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 TRBV4-1A0A0J9YWV2 114 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 IGHV3-64DA0A0J9YX35 117 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 CLDN34H7C241 214 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 MLNRO43193 412 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 GPANK1O95872 356 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 RENP00797 406 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 IGHV4-38-2P0DP08 117 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 HIST1H3AP68431 136 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 IL13RA1P78552 427 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 COX10Q12887 443 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 HIST2H3PS2Q5TEC6 136 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 C8orf82Q6P1X6 216 aaPredicted RBP17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 HIST2H3AQ71DI3 136 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 OR52J3Q8NH60 311 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 TMEM246Q9BRR3 403 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 CCDC134Q9H6E4 229 aa17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 UNKLQ9H9P5 680 aaKnown RBP17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 SRA1Q9HD15 236 aaKnown RBP17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 SAMD4AQ9UPU9 718 aaKnown RBP17.44■□□□□ 0.38
CHRNA4-214ENST00000631289 FSTL3O95633 263 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 PPP1R3DO95685 299 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 FPR3P25089 353 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 PITPNBP48739 271 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 FXYD6P3P58550 94 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 ECH1Q13011 328 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 SEC23BQ15437 767 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 SLC9A3R2Q15599 337 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 ZNF404Q494X3 552 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 SLC36A3Q495N2 470 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 GLYATQ6IB77 296 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 LEG1Q6P5S2 330 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 CORO6Q6QEF8 472 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 C9orf139Q6ZV77 190 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 OR2AJ1Q8NGZ0 328 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 FANK1Q8TC84 345 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 UPRTQ96BW1 309 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 PITX2Q99697 317 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 CDADC1Q9BWV3 514 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 WDR76Q9H967 626 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 B9D1Q9UPM9 204 aa17.43■□□□□ 0.38
CHRNA4-214ENST00000631289 TRRAPQ9Y4A5 3859 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 POM121CA8CG34 1229 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 DCTN6O00399 190 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 DIRAS1O95057 198 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 SLC6A6P31641 620 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 SMIM11AP58511 58 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 PSME3P61289 254 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 PAX2Q02962 417 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 MALLQ13021 153 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 OR11L1Q8NGX0 322 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 C7orf34Q96L11 122 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 NUDT16L1Q9BRJ7 211 aaKnown RBP17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 DCAF13Q9NV06 445 aaKnown RBP17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 ABCD2Q9UBJ2 740 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 CLN8Q9UBY8 286 aa17.42■□□□□ 0.38
CHRNA4-214ENST00000631289 IGLV1-36A0A0B4J1U3 117 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 TRAV40A0A0B4J280 105 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 KIR2DS1A0A191URI9 304 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 F5H5K5 113 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 HLA-DPB1P04440 258 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 NOS3P29474 1203 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 MDH1P40925 334 aaKnown RBP17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 GATA4P43694 442 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 RFX4Q33E94 735 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 LINC00346Q8IVM7 164 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 OR6V1Q8N148 313 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 ERGIC1Q969X5 290 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 NMNAT3Q96T66 252 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 ATF6BQ99941 703 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 OR52D1Q9H346 318 aa17.41■□□□□ 0.38
CHRNA4-214ENST00000631289 ARPC3O15145 178 aa17.4■□□□□ 0.38
CHRNA4-214ENST00000631289 PLATP00750 562 aa17.4■□□□□ 0.38
CHRNA4-214ENST00000631289 HLA-DQA2P01906 255 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms