RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 FMO3P31513 532 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 GRK5P34947 590 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 LIPAP38571 399 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 CCNIQ14094 377 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 GINS1Q14691 196 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 KRTAP27-1Q3LI81 207 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 FAM209AQ5JX71 171 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 Q6ZR03 302 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 HIPK1Q86Z02 1210 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 OTULINQ96BN8 352 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 ATF6BQ99941 703 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 ZNF556Q9HAH1 456 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 TREM2Q9NZC2 230 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 KCNG2Q9UJ96 466 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 COMMD3-BMI1R4GMX3 469 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 J3QW42 95 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 ZNF593O00488 134 aaPredicted RBP12.06□□□□□ -0.48
PNKP-223ENST00000629179 LMX1BO60663 402 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 DEAF1O75398 565 aaPredicted RBP12.06□□□□□ -0.48
PNKP-223ENST00000629179 TGFAP01135 160 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 SPARCP09486 303 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 OSMP13725 252 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 RAC2P15153 192 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 ZNF3P17036 446 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 ENTPD1P49961 510 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 ECH1Q13011 328 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 HNRNPA0Q13151 305 aaKnown RBP12.06□□□□□ -0.48
PNKP-223ENST00000629179 CDK5R2Q13319 367 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 AVPI1Q5T686 147 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 LINC01590Q5TEZ4 76 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 C1orf146Q5VVC0 180 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 OR2T2Q6IF00 324 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 FAM166AQ6J272 317 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 SLC27A4Q6P1M0 643 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 FBXW12Q6X9E4 464 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 COLCA1Q6ZS62 124 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 DCXRQ7Z4W1 244 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 OR5AS1Q8N127 324 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 ATG16L2Q8NAA4 619 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 OR5L1Q8NGL2 311 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 OR6K6Q8NGW6 343 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 CLDND2Q8NHS1 167 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 HPS1Q92902 700 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 UTP4Q969X6 686 aaKnown RBP12.06□□□□□ -0.48
PNKP-223ENST00000629179 MMADHCQ9H3L0 296 aaPredicted RBP12.06□□□□□ -0.48
PNKP-223ENST00000629179 CGGBP1Q9UFW8 167 aaPredicted RBP12.06□□□□□ -0.48
PNKP-223ENST00000629179 ZDHHC8Q9ULC8 765 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 ATRQ13535 2644 aa12.06□□□□□ -0.48
PNKP-223ENST00000629179 LCATP04180 440 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 RBMXP38159 391 aaKnown RBP12.05□□□□□ -0.48
PNKP-223ENST00000629179 TPTEP56180 551 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 PRSS12P56730 875 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 TNFAIP6P98066 277 aaPredicted RBP12.05□□□□□ -0.48
PNKP-223ENST00000629179 CDK5Q00535 292 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 MVKQ03426 396 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 HFEQ30201 348 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 ZMAT1Q5H9K5 638 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 TMEM236Q5W0B7 351 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 SHQ1Q6PI26 577 aaKnown RBP12.05□□□□□ -0.48
PNKP-223ENST00000629179 OR2Z1Q8NG97 314 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 CCL17Q92583 94 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 NRBF2Q96F24 287 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 ELMOD3Q96FG2 381 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 DIRC2Q96SL1 478 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 C1QTNF5Q9BXJ0 243 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 EGLN1Q9GZT9 426 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 KCNS2Q9ULS6 477 aa12.05□□□□□ -0.48
PNKP-223ENST00000629179 ANK3Q12955 4377 aaKnown RBP12.04□□□□□ -0.48
PNKP-223ENST00000629179 KIAA1324LA8MWY0 1029 aaPredicted RBP12.04□□□□□ -0.48
PNKP-223ENST00000629179 M0R135 149 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 CD55P08174 381 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 ANOS1P23352 680 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 IGFBP5P24593 272 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 DAPP51397 102 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 PCK2Q16822 640 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 CHRFAM7AQ494W8 412 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 TEX30Q5JUR7 227 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 SPATC1Q76KD6 591 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 OR5K1Q8NHB7 308 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 ZNF799Q96GE5 643 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 OR51V1Q9H2C8 321 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 CENPMQ9NSP4 180 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 TMEM160Q9NX00 188 aa12.04□□□□□ -0.48
PNKP-223ENST00000629179 C5orf63A6NC05 138 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 FAM157AC9JC47 383 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 CLDN25C9JDP6 229 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 PRR23D1E9PI22 279 aaPredicted RBP12.03□□□□□ -0.48
PNKP-223ENST00000629179 SURF4O15260 269 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 GLCEO94923 617 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 HMGN1P05114 100 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 PRR23D2P0DMB1 279 aaPredicted RBP12.03□□□□□ -0.48
PNKP-223ENST00000629179 PAICSP22234 425 aaKnown RBP12.03□□□□□ -0.48
PNKP-223ENST00000629179 GSTT1P30711 240 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 SLC6A9P48067 706 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 PRKXP51817 358 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 BLVRAP53004 296 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 CDH15P55291 814 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 LMO4P61968 165 aa12.03□□□□□ -0.48
PNKP-223ENST00000629179 EIF2B1Q14232 305 aaKnown RBP12.03□□□□□ -0.48
PNKP-223ENST00000629179 GK2Q14410 553 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms