RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 FBN2P35556 2912 aa8.34□□□□□ -1.08
PDLIM5-223ENST00000627587 OR6C65A6NJZ3 312 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC22A20A6NK97 555 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF878C9JN71 531 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 E9PLN8 166 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 PRRG2O14669 202 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 RER1O15258 196 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 ARL6IP5O75915 188 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 YES1P07947 543 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 NPR2P20594 1047 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 MTNR1BP49286 362 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 CCR9P51686 369 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 MRPS34P82930 218 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 ROR2Q01974 943 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 HNRNPA0Q13151 305 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 TSPO2Q5TGU0 170 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 KLHL24Q6TFL4 600 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 BTLAQ7Z6A9 289 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 MFSD4AQ8N468 514 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF676Q8N7Q3 588 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 OR51A4Q8NGJ6 313 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 PHYHIPQ92561 330 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 ORAI1Q96D31 301 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 OR14A2Q96R54 314 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 VKORC1Q9BQB6 163 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF416Q9BWM5 594 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 LINC00470Q9BZP3 86 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 CALHM2Q9HA72 323 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 CLEC4AQ9UMR7 237 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 GTF2A1LQ9UNN4 478 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC22A13Q9Y226 551 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 R4GMQ9 66 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 POLQO75417 2590 aa8.33□□□□□ -1.08
PDLIM5-223ENST00000627587 A0A0G2JK05 382 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF879B4DU55 563 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 LOC110117498-PIK3R3F6TDL0 507 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 NCR1O76036 304 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 UCHL1P09936 223 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 ABOP16442 354 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 MAPK3P27361 379 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 HSD11B1P28845 292 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 DCTDP32321 178 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 S100A5P33763 92 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 HIST1H3AP68431 136 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 TAF13Q15543 124 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 TESK1Q15569 626 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF829Q3KNS6 432 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 HIST2H3PS2Q5TEC6 136 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 TMEM211Q6ICI0 200 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 HIST2H3AQ71DI3 136 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 P4HA3Q7Z4N8 544 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 FGD2Q7Z6J4 655 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 CATSPERDQ86XM0 798 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 RDH10Q8IZV5 341 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 LRRC18Q8N456 261 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 ACBD4Q8NC06 268 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 GJC3Q8NFK1 279 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 S100ZQ8WXG8 99 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 FBXO17Q96EF6 278 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 NIPAL2Q9H841 368 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 GP6Q9HCN6 339 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 G6PC2Q9NQR9 355 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 COQ3Q9NZJ6 369 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 CLCF1Q9UBD9 225 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 CRNNQ9UBG3 495 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 PKDREJQ9NTG1 2253 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 A0A075B6Q4 140 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 TRBV5-5A0A0J9YX44 114 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 TMEM269A0A1B0GVZ9 245 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 A0A1W2PPK0 400 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 CTDSP2O14595 271 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 IGHV3-9P01782 118 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 OCM2P0CE71 109 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 BMP4P12644 408 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 MMP16P51512 607 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 FOXG1P55316 489 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 DYNC1I2Q13409 638 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 RSPO1Q2MKA7 263 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 CEACAM16Q2WEN9 425 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 Q499Y3 187 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 HSD17B12Q53GQ0 312 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 FAM27BQ5VT28 67 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 ASPHD2Q6ICH7 369 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 NUFIP2Q7Z417 695 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 SYT9Q86SS6 491 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 TPRA1Q86W33 373 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 GPR148Q8TDV2 347 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 AP3S1Q92572 193 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 THRSPQ92748 146 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 ZDHHC16Q969W1 377 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 APH1AQ96BI3 265 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 DERL3Q96Q80 235 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 FOXB1Q99853 325 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 KCNS3Q9BQ31 491 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 GPR35Q9HC97 309 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 HMG20AQ9NP66 347 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC7A10Q9NS82 523 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 TMEM38BQ9NVV0 291 aa8.32□□□□□ -1.08
PDLIM5-223ENST00000627587 FAM206AQ9NX38 181 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms