RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 HDHD5Q9BXW7 423 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 PRDM14Q9GZV8 571 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 SLCO5A1Q9H2Y9 848 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 SLA2Q9H6Q3 261 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 LIN7CQ9NUP9 197 aaKnown RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 RBFOX1Q9NWB1 397 aaKnown RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 MYEF2Q9P2K5 600 aaKnown RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 EIF3KQ9UBQ5 218 aaKnown RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 SLC7A7Q9UM01 511 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 YARS2Q9Y2Z4 477 aaKnown RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 LOC100509620A0A075B734 347 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 FAM240BA0A1B0GVZ2 78 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 A8MUA0 341 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 C17orf105B2RV13 164 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 SOX30O94993 753 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 NID1P14543 1247 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 CBR1P16152 277 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 PTGER1P34995 402 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 PTGER4P35408 488 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 TALDO1P37837 337 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 UCP3P55916 312 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 RAB25P57735 213 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 LTB4RQ15722 352 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 KCNMB1Q16558 191 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 TIGD3Q6B0B8 471 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 IDO2Q6ZQW0 420 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 MEPCEQ7L2J0 689 aaKnown RBP10.35□□□□□ -0.75
LINC00538-201ENST00000626109 SHFQ7M4L6 423 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 NOXA1Q86UR1 476 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 MEX3DQ86XN8 651 aaKnown RBP10.35□□□□□ -0.75
LINC00538-201ENST00000626109 OR2L13Q8N349 312 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 DUSP18Q8NEJ0 188 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 OR51L1Q8NGJ5 315 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 OR5D13Q8NGL4 314 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 OR14A16Q8NHC5 309 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 TMEM255BQ8WV15 326 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 CDS1Q92903 461 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 DAZLQ92904 295 aaKnown RBP10.35□□□□□ -0.75
LINC00538-201ENST00000626109 C8orf44Q96CB5 159 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 KCTD12Q96CX2 325 aaKnown RBP10.35□□□□□ -0.75
LINC00538-201ENST00000626109 LCORQ96JN0 433 aaPredicted RBP10.35□□□□□ -0.75
LINC00538-201ENST00000626109 IP6K3Q96PC2 410 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 LPAR4Q99677 370 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 ABHD6Q9BV23 337 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 PPP1R3EQ9H7J1 279 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 UFSP2Q9NUQ7 469 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 BABAM2Q9NXR7 383 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 KLHL21Q9UJP4 597 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 HS3ST3B1Q9Y662 390 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 SPTBN4Q9H254 2564 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 IGHV3-20A0A0C4DH32 117 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF98A6NK75 572 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 CGB1A6NKQ9 187 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 HPGDSO60760 199 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 PGDP52209 483 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 TAS2R43P59537 309 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 SEC61GP60059 68 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 ANKRD55Q3KP44 614 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 GLDNQ6ZMI3 551 aaPredicted RBP10.35□□□□□ -0.75
LINC00538-201ENST00000626109 PPP1R32Q7Z5V6 425 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 DPPA2Q7Z7J5 298 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 GPALPP1Q8IXQ4 340 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 ZFP41Q8N8Y5 198 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 SLC16A11Q8NCK7 471 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 OR7G2Q8NG99 324 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 GRPEL2Q8TAA5 225 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 UBASH3BQ8TF42 649 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF559Q9BR84 538 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 PIGUQ9H490 435 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 TRIM36Q9NQ86 728 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 ING3Q9NXR8 418 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 MAT2BQ9NZL9 334 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 CHST2Q9Y4C5 530 aa10.35□□□□□ -0.75
LINC00538-201ENST00000626109 SPTBN2O15020 2390 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 DAPL1A0PJW8 107 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 KLRC4-KLRK1H3BQV0 150 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 PLA2G10O15496 165 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 DHHO43323 396 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 LYRM1O43325 122 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 ORC5O43913 435 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 PSKH1P11801 424 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 B4GALT1P15291 398 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 APEX1P27695 318 aaKnown RBP10.34□□□□□ -0.75
LINC00538-201ENST00000626109 RCVRNP35243 200 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 CEACAM3P40198 252 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 ID1P41134 155 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 KIR2DL3P43628 341 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 HOXC5Q00444 222 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 PMPCAQ10713 525 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF155Q12901 538 aaPredicted RBP10.34□□□□□ -0.75
LINC00538-201ENST00000626109 BICRALQ6AI39 1079 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 KIRREL2Q6UWL6 708 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF836Q6ZNA1 936 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 DGAT2L6Q6ZPD8 337 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 MRPL41Q8IXM3 137 aaKnown RBP10.34□□□□□ -0.75
LINC00538-201ENST00000626109 SYT14Q8NB59 555 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 OR51G2Q8NGK0 314 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 TMEM239Q8WW34 195 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 SPSB1Q96BD6 273 aa10.34□□□□□ -0.75
LINC00538-201ENST00000626109 SDF2Q99470 211 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms