RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 PTX4Q96A99 478 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 WDR13Q9H1Z4 485 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 MYOZ1Q9NP98 299 aaPredicted RBP10.04□□□□□ -0.8
VARS2-213ENST00000625423 RAB22AQ9UL26 194 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 ANKUB1A6NFN9 424 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 CDK2AP1O14519 115 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 NUDT21O43809 227 aaKnown RBP10.04□□□□□ -0.8
VARS2-213ENST00000625423 MGMTP16455 207 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 UNC119Q13432 240 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 BEX5Q5H9J7 111 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 MFSD8Q8NHS3 518 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 RNF133Q8WVZ7 376 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 FOXRED1Q96CU9 486 aaPredicted RBP10.04□□□□□ -0.8
VARS2-213ENST00000625423 ADAT3Q96EY9 351 aaPredicted RBP10.04□□□□□ -0.8
VARS2-213ENST00000625423 NUDT22Q9BRQ3 303 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 FOXQ1Q9C009 403 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 TMEM185BQ9H7F4 350 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 FGF21Q9NSA1 209 aa10.04□□□□□ -0.8
VARS2-213ENST00000625423 ZNF107Q9UII5 783 aaPredicted RBP10.04□□□□□ -0.8
VARS2-213ENST00000625423 CPED1A4D0V7 1026 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 D6RAR5 112 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 TTRP02766 147 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 RAB6AP20340 208 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 AGTR1P30556 359 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 ATXN7L3Q14CW9 347 aaPredicted RBP10.03□□□□□ -0.8
VARS2-213ENST00000625423 HSD17B13Q7Z5P4 300 aaPredicted RBP10.03□□□□□ -0.8
VARS2-213ENST00000625423 C11orf40Q8WZ69 217 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 MRGPRFQ96AM1 343 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 SLAMF6Q96DU3 332 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 CST11Q9H112 138 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 FAM206AQ9NX38 181 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 DUX1O43812 170 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 MMP16P51512 607 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 BIDP55957 195 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 NXPH1P58417 271 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 FGL1Q08830 312 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 C17orf67Q0P5P2 114 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 FOXF1Q12946 379 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 MEF2DQ14814 521 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 DEGS2Q6QHC5 323 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 RTN4RL2Q86UN3 420 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 MISPQ8IVT2 679 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 ST8SIA1Q92185 356 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 ZNF501Q96CX3 271 aaPredicted RBP10.03□□□□□ -0.8
VARS2-213ENST00000625423 CHST11Q9NPF2 352 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 SLC22A11Q9NSA0 550 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 GPN3Q9UHW5 284 aaPredicted RBP10.03□□□□□ -0.8
VARS2-213ENST00000625423 PLEKHA6Q9Y2H5 1048 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 HRH3Q9Y5N1 445 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 A0A0D9SG52 128 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 FAM25EA8MYX2 175 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 BET1O15155 118 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 SYT7O43581 403 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 PIAS2O75928 621 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 UBBP0CG47 229 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 GNB3P16520 340 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 APOBEC1P41238 236 aaKnown RBP10.03□□□□□ -0.8
VARS2-213ENST00000625423 RPS27AP62979 156 aaKnown RBP10.03□□□□□ -0.8
VARS2-213ENST00000625423 UBA52P62987 128 aaKnown RBP10.03□□□□□ -0.8
VARS2-213ENST00000625423 PPP1R1AQ13522 171 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 RAB12Q6IQ22 244 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 C11orf87Q6NUJ2 197 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 COX15Q7KZN9 410 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 APCDD1LQ8NCL9 501 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 PLPP5Q8NEB5 264 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 PXT1Q8NFP0 134 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 OR10H5Q8NGA6 315 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 LHFPL5Q8TAF8 219 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 PRRT1Q99946 306 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 PBOV1Q9GZY1 135 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 COMMD9Q9P000 198 aa10.03□□□□□ -0.8
VARS2-213ENST00000625423 UNC13CQ8NB66 2214 aa10.02□□□□□ -0.8
VARS2-213ENST00000625423 NUPL2O15504 423 aaKnown RBP10.02□□□□□ -0.81
VARS2-213ENST00000625423 OPN1LWP04000 364 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 VSIG8P0DPA2 414 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 ZBTB25P24278 435 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 CD96P40200 585 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 LUMP51884 338 aaPredicted RBP10.02□□□□□ -0.81
VARS2-213ENST00000625423 CAPZA1P52907 286 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 SMAD2Q15796 467 aaKnown RBP10.02□□□□□ -0.81
VARS2-213ENST00000625423 PHF19Q5T6S3 580 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 JMJD6Q6NYC1 403 aaPredicted RBP10.02□□□□□ -0.81
VARS2-213ENST00000625423 KLHL24Q6TFL4 600 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 RHOUQ7L0Q8 258 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 LYG2Q86SG7 212 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 SLC25A42Q86VD7 318 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 KCNRGQ8N5I3 272 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 OR1M1Q8NGA1 313 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 OR13C9Q8NGT0 318 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 OR10K1Q8NGX5 313 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 OR6S1Q8NH40 331 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 STT3BQ8TCJ2 826 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 PPP1R1CQ8WVI7 109 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 VRK1Q99986 396 aaPredicted RBP10.02□□□□□ -0.81
VARS2-213ENST00000625423 TNFSF18Q9UNG2 199 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 MAP1BP46821 2468 aaKnown RBP10.02□□□□□ -0.81
VARS2-213ENST00000625423 KANTRA0A1W2PQU2 76 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 HSD11B1P28845 292 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 AVPR2P30518 371 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms