RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ACBD7Q8N6N7 88 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 SLC26A10Q8NG04 563 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 OR13F1Q8NGS4 319 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 OR6N1Q8NGY5 312 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 OR6N2Q8NGY6 317 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 FCGR1BQ92637 280 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 RORBQ92753 470 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 MCHR2Q969V1 340 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 INTS14Q96SY0 518 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 TTTY10Q9BZA0 68 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 RBM38Q9H0Z9 239 aaKnown RBP10.95□□□□□ -0.66
PNKP-217ENST00000625216 WDR76Q9H967 626 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 BATF3Q9NR55 127 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 GDF2Q9UK05 429 aaPredicted RBP10.95□□□□□ -0.66
PNKP-217ENST00000625216 KLHDC2Q9Y2U9 406 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 NSD1Q96L73 2696 aaPredicted RBP10.95□□□□□ -0.66
PNKP-217ENST00000625216 HIVEP2P31629 2446 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 NAV3Q8IVL0 2385 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 PLCE1Q9P212 2302 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 A0A1W2PQL4 384 aaPredicted RBP10.94□□□□□ -0.66
PNKP-217ENST00000625216 TMEM129A0AVI4 362 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 DAPL1A0PJW8 107 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 SSX4O60224 188 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 SEC14L2O76054 403 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 MPZL1O95297 269 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 SCG5P05408 212 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 QDPRP09417 244 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 PSMB9P28065 219 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 SERPINF1P36955 418 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 RPS27P42677 84 aaKnown RBP10.94□□□□□ -0.66
PNKP-217ENST00000625216 CENPAP49450 140 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 ACTC1P68032 377 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 ACTA1P68133 377 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 SWI5Q1ZZU3 235 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 THEM4Q5T1C6 240 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 C10orf128Q5T292 105 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 SYT6Q5T7P8 510 aaPredicted RBP10.94□□□□□ -0.66
PNKP-217ENST00000625216 CLEC2AQ6UVW9 174 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.94□□□□□ -0.66
PNKP-217ENST00000625216 ZNF485Q8NCK3 441 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 OR10H5Q8NGA6 315 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 OR52N1Q8NH53 320 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 FNDC8Q8TC99 324 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 HTRA1Q92743 480 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 ZNF837Q96EG3 531 aaPredicted RBP10.94□□□□□ -0.66
PNKP-217ENST00000625216 RBP7Q96R05 134 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 ALG8Q9BVK2 526 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 MND1Q9BWT6 205 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 INPP5EQ9NRR6 644 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 CA10Q9NS85 328 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 ERGIC3Q9Y282 383 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 UGT2A1Q9Y4X1 527 aa10.94□□□□□ -0.66
PNKP-217ENST00000625216 A0A1W2PPL8 197 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 B9A039 149 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 LALBAP00709 142 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 HLA-DQA2P01906 255 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 CSF3P09919 207 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 OR2T7P0C7T2 308 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 CECR9P0C854 216 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 NR2C1P13056 603 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 TGFBR2P37173 567 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 ENTPD1P49961 510 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 EFNA4P52798 201 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 BLVRAP53004 296 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 WNT4P56705 351 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 TUBA1BP68363 451 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 GLO1Q04760 184 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 GALEQ14376 348 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 MED22Q15528 200 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 TIGD6Q17RP2 521 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 MST1LQ2TV78 715 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 FOXL2NBQ6ZUU3 175 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 TUBA1AQ71U36 451 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 GPR141Q7Z602 305 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 KLHL36Q8N4N3 616 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 NUP37Q8NFH4 326 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 OR2T27Q8NH04 317 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 SPRYD4Q8WW59 207 aaPredicted RBP10.93□□□□□ -0.66
PNKP-217ENST00000625216 NANOS1Q8WY41 292 aaKnown RBP10.93□□□□□ -0.66
PNKP-217ENST00000625216 C11orf40Q8WZ69 217 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 OPALINQ96PE5 141 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 ULBP2Q9BZM5 246 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 YIPF3Q9GZM5 350 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 B3GNT2Q9NY97 397 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 KCNG2Q9UJ96 466 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 TLN2Q9Y4G6 2542 aa10.93□□□□□ -0.66
PNKP-217ENST00000625216 ZANQ9Y493 2812 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 ABCA2Q9BZC7 2435 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 ZNF670-ZNF695F2Z2N8 137 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 MAGEB4O15481 346 aaPredicted RBP10.92□□□□□ -0.66
PNKP-217ENST00000625216 DHHO43323 396 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 F12P00748 615 aaPredicted RBP10.92□□□□□ -0.66
PNKP-217ENST00000625216 SPARCP09486 303 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 LAP3P28838 519 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 CDAP32320 146 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 LIPAP38571 399 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 CAPZA2P47755 286 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 SNRPD2P62316 118 aaKnown RBP10.92□□□□□ -0.66
PNKP-217ENST00000625216 HSF2Q03933 536 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms