RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PMP2P02689 132 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 FCGR3AP08637 254 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 RAB6AP20340 208 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 HAAOP46952 286 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 TAS2R31P59538 309 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 SQSTM1Q13501 440 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 CCINQ13939 588 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 C2orf27AQ580R0 203 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 CSNK1A1LQ8N752 337 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 SLC22A8Q8TCC7 542 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 TAAR8Q969N4 342 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 C8orf44Q96CB5 159 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 DNAJA3Q96EY1 480 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 SCARF2Q96GP6 870 aaPredicted RBP12.63□□□□□ -0.39
LDB3-209ENST00000623056 NECAB3Q96P71 396 aaPredicted RBP12.63□□□□□ -0.39
LDB3-209ENST00000623056 AQP10Q96PS8 301 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 SULT4A1Q9BR01 284 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 MRPL22Q9NWU5 206 aaKnown RBP12.63□□□□□ -0.39
LDB3-209ENST00000623056 RHBDD3Q9Y3P4 386 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 LOC390937A0A1W2PQ73 354 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 LMX1BO60663 402 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 ADAP1O75689 374 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 IGHV2-70P01814 119 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 IFNA6P05013 189 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 LYL1P12980 280 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 NME2P22392 152 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 RIDAP52758 137 aaKnown RBP12.63□□□□□ -0.39
LDB3-209ENST00000623056 TMEM244Q5VVB8 128 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 PSRC1Q6PGN9 363 aaPredicted RBP12.63□□□□□ -0.39
LDB3-209ENST00000623056 CBLN3Q6UW01 205 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 RD3Q7Z3Z2 195 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 HOGA1Q86XE5 327 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 SPPL3Q8TCT6 385 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 AKR1E2Q96JD6 320 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 SLC5A7Q9GZV3 580 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 RAB22AQ9UL26 194 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 LRP12Q9Y561 859 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 C11orf98E9PRG8 122 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 XKRYO14609 159 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 PRKNO60260 465 aaPredicted RBP12.62□□□□□ -0.39
LDB3-209ENST00000623056 FBXO24O75426 580 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 OR6A2O95222 327 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 APBB3O95704 486 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 MT-ND4LP03901 98 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 SERPINA5P05154 406 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 CD1CP29017 333 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 SKP2Q13309 424 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 BTNL8Q6UX41 500 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 LYPD6Q86Y78 171 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 OR9A4Q8NGU2 314 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 KIRREL1Q96J84 757 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 KLHDC3Q9BQ90 382 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 PDE7BQ9NP56 450 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 RPS10P5Q9NQ39 176 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 DZANK1Q9NVP4 752 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 HHLA2Q9UM44 414 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 TIMM10BQ9Y5J6 103 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 LOC107986453A0A1B0GWG9 222 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 LINC01553A4QN01 128 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 PRAMEF26H0Y7S4 382 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 TXNL1O43396 289 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 GNB3P16520 340 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 C5AR1P21730 350 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 UNC119Q13432 240 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 TGIF1Q15583 401 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 KCTD18Q6PI47 426 aaPredicted RBP12.62□□□□□ -0.39
LDB3-209ENST00000623056 FAM219AQ8IW50 185 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 C16orf52Q8NHV5 167 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 OR1E3Q8WZA6 343 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 FAM46BQ96A09 425 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 ABHD6Q9BV23 337 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 TWSG1Q9GZX9 223 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 PRR13Q9NZ81 148 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 EMC9Q9Y3B6 208 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 ARID1BQ8NFD5 2236 aaPredicted RBP12.62□□□□□ -0.39
LDB3-209ENST00000623056 UNC80Q8N2C7 3258 aa12.62□□□□□ -0.39
LDB3-209ENST00000623056 SLC31A1O15431 190 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 SLC16A7O60669 478 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 ZNF14P17017 642 aaPredicted RBP12.61□□□□□ -0.39
LDB3-209ENST00000623056 ID4P47928 161 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 PDGFRLQ15198 375 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 SLC9A3R2Q15599 337 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 TMEM128Q5BJH2 165 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 ACER2Q5QJU3 275 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 FNDC7Q5VTL7 733 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 RPL7L1Q6DKI1 246 aaKnown RBP12.61□□□□□ -0.39
LDB3-209ENST00000623056 MARCH3Q86UD3 253 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 RTN4RL2Q86UN3 420 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 OR51F2Q8NH61 342 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 BAHD1Q8TBE0 780 aaPredicted RBP12.61□□□□□ -0.39
LDB3-209ENST00000623056 CNTD2Q9H8S5 307 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 TAF9BQ9HBM6 251 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 RAB18Q9NP72 206 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 XIRP2A4UGR9 3374 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 A6NLC8 198 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 GATCO43716 136 aaKnown RBP12.61□□□□□ -0.39
LDB3-209ENST00000623056 CLN5O75503 358 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 IGHV2-5P01817 119 aa12.61□□□□□ -0.39
LDB3-209ENST00000623056 CSTBP04080 98 aaKnown RBP12.61□□□□□ -0.39
LDB3-209ENST00000623056 GDI1P31150 447 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms