RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 DDOSTP39656 456 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 CX3CR1P49238 355 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 BTG1P62324 171 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 RAB35Q15286 201 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 C1orf100Q5SVJ3 147 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 LINGO2Q7L985 606 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 TMEM251Q8N6I4 163 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 YIPF5Q969M3 257 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 FAM3DQ96BQ1 224 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 SLC25A38Q96DW6 304 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 ZFP3Q96NJ6 502 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 DPAGT1Q9H3H5 408 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 NEK6Q9HC98 313 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 ATPIF1Q9UII2 106 aa14.43□□□□□ -0.1
LDB3-208ENST00000623007 MRPS7Q9Y2R9 242 aaKnown RBP14.43□□□□□ -0.1
LDB3-208ENST00000623007 DHRS7CA6NNS2 312 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 P2RY10O00398 339 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 RER1O15258 196 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 KRT33AO76009 404 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 ALX3O95076 343 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 SPNP16150 400 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 RAB6AP20340 208 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 SLC6A1P30531 599 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 OTX1P32242 354 aaPredicted RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 GNALP38405 381 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 MAGEB1P43366 347 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 RAG2P55895 527 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 CLDN18P56856 261 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 ZNF121P58317 390 aaPredicted RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 ENDOGQ14249 297 aaKnown RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 RAB12Q6IQ22 244 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 DRAM2Q6UX65 266 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 GALNTL5Q7Z4T8 443 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 SLC22A24Q8N4F4 322 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 SMAD5Q99717 465 aaKnown RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 MARVELD1Q9BSK0 173 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 ACTR6Q9GZN1 396 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 TMEM38BQ9NVV0 291 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 TAS2R4Q9NYW5 299 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 ZNF891A8MT65 544 aaPredicted RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 SULT1C2O00338 296 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 MRPL33O75394 65 aaKnown RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 ARSBP15848 533 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 HLA-DMAP28067 261 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 FAUP35544 74 aaKnown RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 KIR2DL3P43628 341 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 PPIAP62937 165 aaKnown RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 RTP5Q14D33 572 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 ZNF766Q5HY98 468 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 OTPQ5XKR4 325 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 ABHD12BQ7Z5M8 362 aaPredicted RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 ORAI1Q96D31 301 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 BCO1Q9HAY6 547 aa14.42□□□□□ -0.1
LDB3-208ENST00000623007 NOSIPQ9Y314 301 aaKnown RBP14.42□□□□□ -0.1
LDB3-208ENST00000623007 LINC00854A0A1B0GVQ3 168 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 MEIOCA2RUB1 952 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 METTL21EPA6NDL7 271 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 RPL36A-HNRNPH2H7BZ11 118 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 ALDOBP05062 364 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 KLK2P20151 261 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 PLA2G5P39877 138 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 MAGEA5P43359 124 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 POU3F4P49335 361 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 STARP49675 285 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 TPTEP56180 551 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 RSBN1Q5VWQ0 802 aaPredicted RBP14.41□□□□□ -0.1
LDB3-208ENST00000623007 ZNF529Q6P280 563 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 IGFL2Q6UWQ7 119 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 KRT74Q7RTS7 529 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 DPPA2Q7Z7J5 298 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 ADGRE4PQ86SQ3 457 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 OR1M1Q8NGA1 313 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 CPNE2Q96FN4 548 aaPredicted RBP14.41□□□□□ -0.1
LDB3-208ENST00000623007 PGAM5Q96HS1 289 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 FOXB1Q99853 325 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 NUDT16L1Q9BRJ7 211 aaKnown RBP14.41□□□□□ -0.1
LDB3-208ENST00000623007 PRRG4Q9BZD6 226 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 SLCO5A1Q9H2Y9 848 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 METTL17Q9H7H0 456 aaPredicted RBP14.41□□□□□ -0.1
LDB3-208ENST00000623007 CRLF2Q9HC73 371 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 PLEK2Q9NYT0 353 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 PLA2G3Q9NZ20 509 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 CLEC4AQ9UMR7 237 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 TIMM10BQ9Y5J6 103 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 KNTC1P50748 2209 aa14.41□□□□□ -0.1
LDB3-208ENST00000623007 A0A0B4J203 849 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 DHFRP00374 187 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 ITGA5P08648 1049 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 FCGR2AP12318 317 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 GABRA1P14867 456 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 CPN1P15169 458 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 GSK3AP49840 483 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 RAB25P57735 213 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 C2orf76Q3KRA6 126 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 PHYHD1Q5SRE7 291 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 ZNF813Q6ZN06 617 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 Q6ZSR3 168 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 COMMD2Q86X83 199 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 CELF2-AS1Q8N7Q2 184 aa14.4□□□□□ -0.1
LDB3-208ENST00000623007 PLPP7Q8NBV4 271 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms